F. necrophorum 1_1_36S_FusoPortal_Gene_368

InterPro predicted function: "Smr domain;DNA mismatch repair protein MutS
InterPro Accessions: IPR002625;IPR000432

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_368.out

Amino Acids: 778

ORF FASTA file - Amino Acids

MNLHSHRVLEFDKLKEKIMTYLVIENNVEEIMNLKPFNDLSSLQQEFVYVQDCMDFMQYD GGLDVRHLKDICSLTEKIKLIGTYLEVDELWDINMNLRFFRIFQAQLEDLGKYKALRDYM RQVSPLRLIEDLISKAVDSEKQIKDEASLDLRDIRIHKKMLAQNIRRKFDELFEEASIAV AFQERIVTERDGRMVVPVKVDFKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETK EKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFGLEEACHVPTIQGKEILY LEKARHPFIPKEKVVPLTFEIGKDYRILLITGPNTGGKTVALKTAGLLTLMALSGIPIPA SEHSKIGFFQGVFADIGDEQSIEQSLSSFSAHVTNLQEILREVHRNCLVLLDELGSGTDP TEGSAFAMSIIDYLKEKKCNAIITTHYSEVKAHGYNEEGIETASMEFDTATLSPTYRLLM GIPGESNALTIAKRLGVPQDIIDKAQSYISEDNKKIELMINNIKNKSESLDRMQAELEGL REAARMNQQKWEEERRNLEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKEENSKEQ AKQIQKNLNMLSSALKEEKNKTISITKTMKKKANFKEGDRVFVKNINQFASVLKINAMKE SAQVQAGILKLEVPFDEIRVTEEKKEKRYQVQVHKKIAVRSEIDLRGKMVDEGIHELETY LDRALLNGYHEIYVIHGKGTGALRNGILDYLKTCPYVKEFRIGGHGEGGLGCTVVTLK

Coding DNA - Genome Coordinates: 377956-380292 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAATTTGCATAGTCATCGAGTCTTGGAATTTGATAAATTAAAAGAAAAAATAATGACTTATTTAGTGA TTGAAAACAATGTAGAAGAAATTATGAATTTAAAGCCGTTTAACGACTTAAGTTCCTTACAACAGGAGTT TGTATATGTGCAAGATTGTATGGATTTTATGCAATATGATGGAGGCTTGGATGTAAGGCATTTAAAGGAT ATTTGCAGTTTGACCGAAAAAATAAAGCTTATTGGAACCTATTTGGAAGTAGATGAGTTATGGGATATCA ACATGAATCTGCGATTTTTTAGAATTTTTCAGGCACAGTTGGAAGATTTGGGAAAATACAAGGCTTTACG GGATTATATGAGGCAGGTGTCTCCCCTTCGATTGATAGAAGATTTGATTTCAAAAGCGGTGGATTCGGAG AAGCAAATTAAGGACGAAGCTTCTTTGGATTTAAGGGACATTCGAATTCATAAGAAAATGTTGGCTCAAA ATATTCGACGAAAGTTTGATGAATTATTCGAGGAAGCCAGTATCGCTGTAGCTTTTCAAGAGAGAATTGT CACAGAGCGGGACGGAAGAATGGTAGTTCCCGTCAAGGTGGATTTTAAGGGTTTGATTAAGGGGATTGAA CATGACAGGTCTTCCAGCGGACAAACGGTTTTCATTGAGCCTTTGTCCATTGTTTCTTTGAACAATAAGA TGAGAGAGTTGGAAACAAAAGAAAAAGAAGAAATTCGAAAGATTTTATTGAGACTTTCGGAACAAATTCG AAATCATCAGGATGAGATGTATAAGATAGGAACTATGATTTTATATCTGGATCGTCTACAAGCAAAGGCG AATTTCGGTTTAGAAGAAGCCTGTCATGTTCCTACGATACAGGGAAAGGAAATTCTGTATTTGGAAAAAG CGAGGCATCCTTTTATTCCAAAAGAAAAAGTGGTGCCTTTGACCTTTGAAATTGGAAAAGATTATAGAAT TTTATTGATTACGGGACCTAATACGGGAGGGAAAACGGTTGCTCTAAAAACCGCGGGTCTTTTAACTTTA ATGGCTCTTTCCGGAATTCCCATTCCTGCTTCCGAACATTCGAAGATTGGATTTTTTCAGGGAGTCTTTG CAGACATTGGAGATGAACAAAGTATAGAGCAGTCTCTCTCTTCTTTTTCAGCTCATGTGACGAATTTACA AGAGATTTTACGGGAAGTACATCGAAATTGTCTTGTATTATTGGATGAACTCGGTTCCGGAACGGATCCT ACCGAAGGGTCCGCTTTCGCCATGTCTATTATTGATTATTTAAAAGAGAAAAAGTGTAATGCCATTATTA CCACTCACTACAGTGAGGTAAAGGCACATGGATACAATGAGGAGGGGATTGAAACCGCTTCCATGGAATT TGATACGGCTACTTTGTCTCCTACCTATCGTCTTTTGATGGGGATTCCCGGTGAGAGCAACGCTTTGACG ATTGCAAAGCGCTTGGGAGTTCCTCAAGACATTATCGACAAGGCACAGAGTTATATCAGCGAGGACAATA AAAAAATCGAGCTTATGATCAATAATATTAAAAATAAATCGGAAAGTTTGGACAGGATGCAGGCAGAATT GGAAGGACTAAGAGAAGCCGCTCGTATGAATCAACAAAAATGGGAAGAAGAAAGAAGAAACTTGGAAAGA GAAAAAAATGAAATTCTAAAGAAGGCCTATGAAGATTCCGAAAAAATGATGAATGAAATGCGAGCCAAAG CCTCTGCTCTGATTGAAAAAATTCAAAAAGAAGAAAACAGCAAAGAGCAGGCAAAACAAATTCAAAAAAA TTTAAATATGTTAAGCTCCGCCTTGAAAGAAGAAAAAAACAAAACCATTTCTATCACAAAAACAATGAAA AAGAAAGCAAACTTCAAAGAGGGAGATCGTGTTTTTGTTAAAAATATCAATCAATTTGCCAGTGTTTTGA AAATCAATGCCATGAAAGAAAGTGCACAGGTACAGGCAGGGATTCTGAAATTGGAAGTTCCTTTTGATGA AATTCGAGTGACGGAGGAAAAGAAAGAGAAAAGATATCAAGTGCAGGTGCATAAAAAAATAGCGGTACGA AGTGAGATTGATCTGCGTGGAAAAATGGTGGATGAAGGAATTCACGAATTGGAAACCTATTTGGATAGGG CTTTGTTGAACGGATATCATGAAATTTACGTTATTCACGGAAAGGGAACCGGTGCTTTGCGAAATGGAAT TTTGGATTATTTAAAGACCTGCCCCTATGTAAAAGAATTCCGAATAGGAGGTCATGGAGAAGGAGGCTTG GGATGTACGGTGGTAACTCTAAAATAA

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