F. necrophorum 1_1_36S_FusoPortal_Gene_49

InterPro predicted function: "Uncharacterised protein family UPF0313
InterPro Accessions: IPR013704;IPR007197

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_49.out

Amino Acids: 567

ORF FASTA file - Amino Acids

MKFLPTTREEMKQLGWDRLDVLLISGDTYLDTSYNGSALVGKWLVKHGFRVGIIAQPEVD SPKDITRLGEPDLFFAISGGCVDSMVANYTATKKRRQQDDFTPGGLNDRRPDRAVLVYSN MIRRFFKGTQKKIVISGIESSLRRITHYDYWSNKLRKPILFDAKADILSYGMGEMSMLAL ARALRHGKDWKDIRGLSYISREPREDYLNLPSHAECLESKDTFTEAFHQFYFNCDPITAK GLCQKCDDRYLIQNPPSMTYTEEEMDAIYSMEFARDVHPYYKAMGAVRALDTIRYSVTTH RGCYGECNFCAIAIHQGRTVMSRSQSSIVEEVGEITKLPKFKGNISDVGGPTANMYALEC KKKLKLGSCPDRRCLYPKKCPSLRVNHREQIDLLRKLKKLPKIKKIFIASGIRYDMILED TQCGQMYLKELVQDHISGQMKIAPEHTEDSILSLMGKDGRSCLNEFKNQFYALNQKLGKK QFLTYYLIAAHPGCREKEMIDLKKFASRELRVNPEQIQIFTPTPSTYSTLMYYTEKDPFT GKKLFVEKDNGKKQKQKEIVLDKKYRS

Coding DNA - Genome Coordinates: 53260-51557 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAATTTTTACCAACAACTCGAGAAGAAATGAAACAATTGGGTTGGGATCGTTTAGATGTTTTATTGA TTTCAGGAGATACCTATTTGGACACTTCTTATAATGGAAGTGCTTTGGTTGGGAAATGGCTTGTCAAACA CGGCTTTCGGGTGGGAATCATTGCACAGCCGGAAGTGGACAGTCCCAAAGATATTACCCGTCTGGGAGAA CCTGATTTATTTTTTGCCATTTCCGGAGGTTGTGTGGATTCTATGGTAGCGAATTATACCGCTACGAAAA AAAGAAGGCAACAGGATGATTTTACTCCCGGAGGCTTGAATGATAGAAGACCGGATAGAGCTGTTTTGGT ATATTCCAATATGATACGACGTTTTTTTAAAGGAACACAGAAAAAAATAGTCATCAGTGGGATTGAATCA AGTTTAAGAAGAATTACACATTATGATTATTGGAGCAATAAATTAAGAAAGCCGATTTTATTTGATGCTA AAGCGGATATTCTCTCCTATGGTATGGGAGAGATGTCAATGCTTGCTTTGGCAAGAGCCTTACGACATGG AAAAGATTGGAAAGATATCCGAGGACTTTCTTATATATCCAGGGAACCGAGGGAAGATTATTTGAATTTG CCGAGTCATGCGGAATGTTTGGAAAGTAAAGATACTTTTACGGAGGCCTTTCATCAATTTTATTTCAATT GCGATCCGATTACCGCCAAAGGACTTTGTCAAAAATGTGATGATAGATATTTAATACAGAATCCTCCATC TATGACTTACACTGAAGAAGAAATGGATGCTATCTATTCTATGGAGTTTGCCAGAGATGTTCATCCTTAT TATAAGGCAATGGGAGCAGTAAGAGCTTTGGATACCATTCGCTATTCTGTAACCACGCATCGCGGTTGTT ATGGAGAATGTAATTTTTGTGCCATCGCTATTCATCAAGGAAGAACGGTCATGTCGAGAAGTCAGTCTTC CATTGTGGAGGAAGTGGGAGAAATTACAAAACTTCCTAAGTTTAAGGGAAATATTTCTGATGTAGGAGGT CCTACGGCAAATATGTATGCCTTAGAATGTAAGAAAAAATTAAAATTGGGTTCCTGTCCGGATAGGCGAT GTCTATATCCGAAAAAATGTCCATCTTTGCGAGTCAATCATAGGGAGCAAATCGATTTGTTACGAAAATT AAAAAAACTTCCGAAGATTAAGAAAATTTTTATTGCTTCCGGAATACGTTATGATATGATTTTAGAGGAT ACACAATGTGGACAAATGTATTTAAAAGAGTTGGTGCAAGATCATATCTCCGGACAAATGAAAATAGCTC CGGAGCATACGGAGGATAGTATTTTATCGTTAATGGGAAAAGACGGACGTTCCTGCTTAAACGAATTTAA AAATCAGTTTTATGCCTTGAATCAAAAGTTGGGGAAAAAACAATTTTTAACCTATTATTTAATTGCTGCT CATCCCGGTTGTCGAGAAAAAGAAATGATAGATCTAAAAAAATTTGCTTCGAGAGAATTAAGAGTAAATC CGGAGCAGATTCAAATATTTACTCCGACTCCGTCTACTTATTCCACTTTAATGTACTACACGGAAAAAGA TCCTTTTACAGGAAAAAAATTATTTGTCGAAAAAGACAACGGAAAAAAACAAAAACAAAAAGAAATTGTG CTTGATAAGAAATATAGGAGTTGA

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