F. necrophorum 1_1_36S_FusoPortal_Gene_72

InterPro predicted function: "Penicillin-binding protein
InterPro Accessions: IPR001460;IPR005311

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_72.out

Amino Acids: 609

ORF FASTA file - Amino Acids

MRRKKNEFFLGMEDNSRGKIYLGVIIIFFSVLLMRMFYLQVLQGKEFRYLSEKNQFKLKK IPSPRGQIFDSTGKLIVTNGVGYHLVYLRERNHENEYVDAIAELTGYDKEYILKRIKYGE IFPYTRENVLIEDLEEEKAYKLMEKIVDYPYLEVQAYSKRKYLYDSVAAHSIGYVKKISR KEYEALKEEGYTPRDVVGKEGLEKQYDRALKGEDGYEYIEVNAFNKIQRKMDRRDPVPGK NLHLSLNMELQQYMEEQYREEGRAGAFIALDAKTGEIITLVSYPTFSLNMFSSQISQAVW NEIMNDKRRPLGNKAVAGEYPPGSVFKVISALAFLESGIDPKQKYLDATGYYQIGKWKWR AWKRGGHGLVDMKKSLVESANPYYYRLADQVGYKPIADMAKRFGLGSPTGIDIPGERVGA IPTPDWKKKKIKASWVKGDTILMSIGQGYDLVTPLQIAKAYSIIANKGYAYSPHLVKYLE DVKTKKREKVVGKRMEVKGVPKEYYDIINEALIATVSQDNGTTRILRNPKYLVAAKSGSA QNSQSKTTHAWVAGYFPADNPEIVFTALLTAAGGGGAVAGGMTKKFMDKYDEMKNPPPKI EKTEETINE

Coding DNA - Genome Coordinates: 77083-75254 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAGAAGAAAAAAAAACGAATTTTTCTTGGGTATGGAAGATAATAGTCGTGGAAAAATCTATTTAGGAG TGATTATTATTTTTTTCTCAGTCCTTTTGATGAGAATGTTCTATTTACAGGTATTACAAGGCAAAGAATT TCGATATTTATCGGAAAAAAATCAATTTAAATTAAAAAAAATTCCCTCTCCGAGAGGCCAAATTTTTGAC AGTACCGGGAAGTTGATTGTCACGAACGGAGTGGGCTATCATCTTGTCTATTTACGAGAAAGAAATCATG AGAATGAGTATGTAGATGCTATTGCAGAATTGACAGGCTATGATAAGGAATATATTTTAAAAAGAATTAA ATATGGAGAAATTTTTCCCTATACGCGTGAAAATGTTTTGATTGAGGATTTGGAAGAGGAGAAAGCCTAT AAATTGATGGAAAAAATTGTGGACTATCCGTATTTAGAAGTACAGGCATATTCTAAGAGAAAATATTTAT ATGATTCTGTGGCGGCTCATAGCATCGGTTATGTTAAAAAGATTTCCAGAAAGGAGTATGAAGCCCTAAA AGAAGAAGGCTATACTCCGAGAGATGTCGTAGGGAAAGAAGGTCTGGAAAAGCAGTATGATAGAGCGTTA AAAGGGGAAGACGGCTATGAGTATATTGAAGTCAATGCTTTTAATAAAATTCAGAGAAAAATGGATAGAA GAGATCCTGTTCCCGGAAAAAATCTTCATCTGTCTTTAAATATGGAATTACAACAATATATGGAAGAACA ATATCGAGAAGAAGGAAGAGCGGGAGCTTTTATTGCCTTAGATGCAAAAACAGGAGAAATTATTACTTTG GTAAGTTATCCGACTTTTTCCTTGAATATGTTCAGTTCTCAAATCAGCCAGGCGGTTTGGAATGAAATTA TGAATGATAAGAGAAGACCTTTAGGAAATAAAGCGGTTGCAGGGGAATATCCACCCGGTTCGGTATTCAA AGTTATTTCCGCATTGGCATTTTTGGAGAGTGGGATTGATCCCAAACAAAAATATTTGGATGCTACAGGA TATTATCAAATTGGAAAATGGAAGTGGCGAGCCTGGAAACGTGGAGGACATGGATTGGTCGATATGAAAA AATCTCTAGTGGAGTCTGCCAATCCCTATTATTACCGTTTGGCAGATCAAGTCGGCTATAAGCCGATTGC CGATATGGCAAAGAGATTTGGATTGGGAAGTCCTACGGGGATTGATATTCCCGGAGAAAGAGTAGGAGCC ATTCCTACACCGGATTGGAAAAAGAAAAAAATAAAAGCTTCTTGGGTAAAAGGAGATACTATCCTGATGT CCATTGGGCAGGGCTATGATTTGGTAACCCCTCTTCAGATTGCGAAAGCCTATTCCATCATTGCGAATAA AGGCTATGCCTATTCTCCGCACTTGGTAAAGTATTTGGAAGATGTAAAAACGAAAAAACGAGAAAAGGTA GTAGGGAAAAGAATGGAAGTGAAAGGGGTCCCCAAAGAATATTATGATATCATCAATGAGGCACTGATTG CAACAGTTTCACAGGACAACGGGACTACAAGAATTTTAAGAAATCCTAAATATTTAGTAGCTGCCAAGAG TGGATCGGCACAAAATTCACAGTCGAAAACGACTCATGCTTGGGTAGCGGGATATTTTCCGGCAGACAAT CCGGAAATTGTATTTACAGCTTTATTGACAGCAGCAGGAGGGGGAGGAGCTGTTGCAGGAGGGATGACGA AAAAATTTATGGATAAATATGATGAAATGAAGAATCCCCCACCAAAGATAGAAAAAACGGAGGAAACAAT AAATGAATAA

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