F. necrophorum 1_1_36S_FusoPortal_Gene_743

InterPro predicted function: THUMP domain;Putative RNA methylase domain
InterPro Accessions: IPR004114;IPR000241

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_743.out

Amino Acids: 385

ORF FASTA file - Amino Acids

MKRKFSIVASSTMGLESIVKEECKKLGFSNIQVWNGRVEFDGDFETLVRANIHLRCADRI FVKMAEFKALSYEELFQEVKKIAWEDWIEEKGEFPIAWVSSVKSKLYSKADIQRIAKKAI VERLKTKYQREVFEETGAKYRIKIQCHHDVFLVMLDSSGEGLNRRGYRSLKNEAPLKETM AAALIYLAKWQGGERAFLDPMCGTGTLAIEAAMIARNIAPGANRNFAAEEWSVIPEEIWI EARDEAFSREDYEKKVKIYASDIEEETIQIARKNIERAGVEGDILLSCQDFQEVKVEEKA GAMITNPPYGERLSDPVEVEELYRNLGQFCRKRLPKWSYYIITSFEMFEKVFGKKANKNR KLYNGGIKCYYYQYYGEDRVNGREI

Coding DNA - Genome Coordinates: 767200-766043 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAGAGGAAGTTTAGTATTGTGGCATCCAGCACGATGGGCTTGGAGAGTATTGTAAAAGAAGAGTGTA AAAAATTGGGGTTTTCAAATATACAAGTATGGAATGGGAGAGTGGAATTTGACGGAGATTTTGAAACCTT GGTCAGAGCCAATATTCATCTTCGATGTGCCGATCGAATTTTTGTGAAAATGGCAGAGTTTAAGGCCTTA AGTTATGAGGAATTATTTCAGGAAGTAAAGAAAATAGCTTGGGAAGATTGGATAGAAGAGAAGGGAGAAT TTCCGATTGCCTGGGTGAGTTCGGTAAAGTCAAAGTTATACTCCAAGGCGGATATTCAAAGAATTGCAAA AAAAGCAATCGTCGAACGATTAAAGACAAAGTATCAGAGGGAAGTGTTTGAGGAAACAGGAGCAAAGTAT CGCATCAAAATCCAATGTCATCATGATGTATTTCTTGTGATGTTGGACAGCAGTGGAGAAGGATTGAATC GTAGAGGATACCGGAGTCTAAAAAATGAAGCTCCTTTAAAAGAAACCATGGCAGCTGCCTTGATTTATTT GGCAAAATGGCAGGGAGGAGAAAGAGCTTTTTTGGATCCGATGTGCGGAACGGGAACCTTAGCGATCGAA GCAGCGATGATAGCCAGAAATATTGCTCCCGGAGCGAATCGAAATTTTGCTGCGGAAGAATGGAGTGTGA TTCCGGAAGAAATTTGGATAGAGGCAAGAGATGAAGCATTTTCAAGGGAAGATTATGAAAAGAAAGTGAA GATTTATGCTTCGGATATTGAGGAAGAGACGATTCAGATTGCAAGAAAAAATATAGAAAGAGCGGGGGTG GAAGGAGATATTCTTCTTTCCTGTCAAGACTTTCAAGAGGTGAAGGTGGAGGAGAAAGCGGGAGCTATGA TTACAAATCCTCCTTATGGAGAGCGTTTGTCGGATCCGGTAGAAGTAGAAGAACTGTATCGAAATTTAGG ACAATTTTGTCGAAAACGTCTACCCAAGTGGTCTTACTATATCATTACTTCCTTCGAAATGTTTGAAAAA GTATTCGGAAAAAAGGCGAATAAAAATAGAAAGCTGTACAACGGCGGAATAAAATGTTATTATTATCAAT ATTATGGAGAAGACAGAGTCAATGGAAGAGAAATATAA

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