F. necrophorum 1_1_36S_FusoPortal_Gene_856

InterPro predicted function: "Signal recognition particle
InterPro Accessions: IPR000897;IPR013822;IPR004125

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_856.out

Amino Acids: 449

ORF FASTA file - Amino Acids

MLDNLGSRFQEIFKKVRGHGKLSESNIKDALKEVKMSLLEADVNYKVVKDFIESIREKAI GTEVLKGINPGQQFIKLVNDELVELLGGTNARLTKASKNPTVLMLSGLQGAGKTTFAGKL AKFLKKQNERVLLVAADVYRPAAIKQLQVLGEQVEVSVYAEEGHQDVLGICERALEKAKE EHDTYMIIDTAGRLHIDETLMEELKNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNENLS IDGVVLTKLDGDTRGGAALSIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVV SLVEKAQSAIEEEEAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQIGD LAPAEKEMKKVEAIIQSMTKQERKKPEILKASRKQRIAKGSGTDVADINRLLKQFDQMKT MMKMFAGGKMPNFPNLNGMMSGKGGRFPF

Coding DNA - Genome Coordinates: 875668-877017 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGTTAGATAATTTAGGATCTAGGTTTCAAGAAATTTTCAAGAAAGTTAGAGGGCATGGAAAATTAAGTG AAAGTAATATCAAAGACGCTTTAAAAGAAGTAAAAATGTCACTTTTAGAAGCAGATGTGAACTATAAAGT AGTCAAAGATTTTATAGAGTCTATTCGAGAGAAAGCGATTGGAACGGAAGTATTAAAAGGAATCAACCCG GGACAGCAATTCATTAAGTTGGTAAATGATGAATTGGTAGAATTGCTTGGAGGAACCAATGCGAGGCTTA CGAAAGCTTCTAAAAATCCGACTGTTTTAATGCTTTCCGGGTTACAAGGAGCAGGGAAGACAACTTTTGC GGGGAAATTGGCGAAGTTTTTAAAAAAACAAAACGAAAGGGTACTCTTGGTAGCTGCCGATGTGTATCGT CCTGCAGCCATTAAGCAGTTACAAGTTTTGGGAGAGCAGGTAGAGGTTTCAGTCTATGCGGAAGAAGGAC ATCAAGACGTACTTGGAATTTGTGAGAGAGCTTTGGAAAAAGCAAAAGAAGAACATGATACTTACATGAT TATTGATACAGCGGGAAGATTGCATATTGATGAAACTCTGATGGAAGAATTGAAGAATATAAAACGATTG ACAAGACCTCAAGAAATTTTATTGGTTGTAGATTCTATGATAGGGCAAGATGCAGTCAATTTAGCAAAGT CTTTCAATGAAAATTTGAGTATTGATGGGGTTGTTTTGACAAAATTGGATGGAGATACTCGTGGAGGGGC AGCTCTATCCATAAAATCGGTGGTAGGAAAACCGATTAAATTCATTGGAGTGGGAGAAAAGTTGGACGAT ATTGAACTATTTCATCCCGATCGTTTGGTTTCCAGAATTTTAGGAATGGGAGATGTCGTTTCTTTAGTCG AAAAAGCACAAAGTGCAATTGAGGAAGAAGAGGCAAAATCTTTGGAGGAAAAAATTCGTACTCAAAAATT TGATTTGAACGATTTTTTAAAACAATTACAAAATATTAAAAAATTAGGCTCTTTGGGAAGTATTTTAAAG TTAATTCCGGGAATGGGACAGATTGGAGACTTAGCTCCTGCAGAAAAAGAAATGAAAAAAGTGGAAGCCA TTATTCAATCTATGACAAAACAGGAGAGAAAGAAACCGGAAATATTGAAGGCAAGTCGAAAACAAAGAAT TGCAAAGGGAAGTGGAACCGATGTGGCGGATATCAATCGTCTGTTGAAACAATTTGATCAAATGAAGACG ATGATGAAAATGTTTGCGGGGGGTAAAATGCCGAACTTTCCAAACTTAAACGGAATGATGTCAGGAAAAG GTGGAAGATTTCCATTTTAA

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