F. necrophorum 1_1_36S_FusoPortal_Gene_922

InterPro predicted function: "DEAD box helicase DbpA/CsdA
InterPro Accessions: IPR005580;IPR011545;IPR001650

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_922.out

Amino Acids: 528

ORF FASTA file - Amino Acids

MEKKEVLKEFRDLGIGEKLLKALSKKGYETPTPIQSLTIPALLTGEKDIIGQAQTGTGKT AAFALPILENIEHQDKIQGIVLTPTRELALQVAEEMNSLGSSKKIKIIPVYGGQSIDIQR KLLRTGADIIVGTPGRVIDFIERKFLRLQDLKYFILDEADEMLNMGFLEEVEKILEATNE DKRMLFFSATMPNEILKVAKKHMKDYEILAVKARELTTDLTDQIYFEVNERDKFEALCRI IDLAEDFYGIVFCRTKTDVNEVVGRLNDRGYDAEGLHGDIGQNYREVTLKRFKARKINIL VATDVAARGIDVNDLSHVINYAIPQEAESYVHRIGRTGRAGKEGTAITFITPQEYRRLLQ IQRIVKTEIRKEQVPEVKDVIQAKKFQIQKDIDEILLEGEYDKFKKLAQDLLKKEEAENI VASLLKLAYEDVLDESNYNEISSTKTVGGGKARLFVALGRKDGMTAKKLVEKVMKVAKVQ DKKIRNVEVYEAFSFITVPFKEAEIIIESFKARQKGKKPLIEKAKSQK

Coding DNA - Genome Coordinates: 950354-951940 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAAAAAAAAGAAGTATTGAAGGAGTTTAGAGACTTAGGTATTGGAGAAAAATTATTAAAAGCATTAT CTAAGAAAGGATATGAAACTCCAACTCCAATTCAAAGTTTAACAATTCCGGCGTTGTTAACAGGAGAAAA GGATATTATTGGACAGGCACAAACAGGAACAGGAAAGACGGCAGCTTTTGCTCTTCCTATTTTAGAGAAT ATAGAACATCAGGATAAAATTCAAGGGATCGTATTGACTCCCACGAGAGAATTGGCCTTACAAGTGGCGG AGGAAATGAATAGTCTGGGAAGTTCCAAAAAAATTAAGATTATTCCGGTCTACGGGGGACAATCCATTGA TATTCAAAGAAAGTTGCTTCGAACAGGAGCGGATATTATTGTAGGAACTCCCGGAAGAGTGATTGATTTT ATTGAGAGAAAGTTTTTGAGACTACAAGATTTGAAATATTTCATACTGGACGAAGCGGATGAAATGTTGA ATATGGGATTTTTGGAAGAGGTGGAAAAAATTCTGGAAGCCACCAATGAGGATAAGAGAATGTTATTTTT CTCTGCGACCATGCCGAATGAAATTTTAAAAGTAGCGAAAAAACATATGAAAGACTATGAGATTTTAGCA GTAAAGGCGAGAGAGTTAACGACAGATTTAACGGATCAAATTTATTTCGAAGTCAATGAACGAGATAAGT TTGAAGCTCTTTGCAGAATTATCGACTTGGCAGAGGATTTTTACGGAATTGTTTTCTGTCGAACCAAAAC GGATGTCAATGAAGTGGTGGGAAGATTAAATGACAGAGGATATGATGCCGAAGGACTGCATGGAGACATT GGACAAAATTACCGAGAAGTGACATTGAAACGATTTAAAGCCAGAAAAATTAACATTTTAGTGGCAACTG ATGTGGCGGCTCGGGGAATTGACGTCAATGATTTGAGTCATGTTATCAACTATGCCATTCCACAGGAAGC CGAAAGTTATGTCCACCGAATCGGAAGAACCGGAAGAGCCGGAAAAGAGGGAACTGCCATCACTTTCATT ACTCCACAGGAATATAGAAGATTATTGCAAATTCAAAGAATTGTGAAAACGGAAATTCGAAAGGAACAAG TTCCGGAAGTGAAAGATGTTATTCAAGCAAAAAAATTTCAAATTCAAAAGGATATTGATGAAATTTTGTT GGAGGGGGAATACGACAAATTTAAAAAACTGGCTCAAGATTTATTGAAGAAAGAGGAGGCGGAAAACATT GTGGCCTCTCTATTAAAACTTGCTTATGAAGATGTTTTGGATGAAAGCAACTACAATGAAATTTCTTCCA CAAAAACAGTAGGAGGCGGAAAGGCAAGACTTTTTGTAGCATTGGGTAGAAAAGACGGAATGACGGCGAA AAAATTAGTGGAAAAAGTGATGAAGGTGGCAAAGGTACAGGATAAAAAAATTCGAAATGTTGAAGTTTAC GAAGCCTTTTCTTTCATTACCGTACCTTTTAAAGAAGCGGAAATTATTATCGAAAGCTTTAAAGCCAGAC AAAAAGGAAAGAAACCATTGATAGAAAAAGCAAAATCACAAAAATAA

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