F. necrophorum 1_1_36S_FusoPortal_Gene_933

InterPro predicted function: "Oligopeptide/dipeptide ABC transporter
InterPro Accessions: IPR013563;IPR003439

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_933.out

Amino Acids: 323

ORF FASTA file - Amino Acids

MENKVLLEVKNLKKYFQTPKGPLHAVDGVNFSIEEGKTLGVVGESGCGKSTTGRVILRLL EATDGEILFEGKNIREYSKAEMNKLRQEMQIIFQDPFASLNPRMTVSEIIAEPLIIHKKC KNKKELEERVLELMETVGLSERLINTYPHELDGGRRQRIGIARALALKPKFIVCDEPVSA LDVSIQAQVLNLMQDLQEKLGLTYMFITHDLSVVKHFSDDIAVMYLGELVEKAPSKELFR NPIHPYTKALLSAIPSTNIRNKMERIRLEGEITSPINPEPGCRFAKRCVYAQDICRKESP KLQEVQGDHFFACHRAEELDFIK

Coding DNA - Genome Coordinates: 964101-965072 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAGAATAAAGTTTTATTAGAAGTAAAGAATCTGAAAAAATATTTCCAAACTCCGAAAGGGCCTCTTC ATGCAGTAGATGGTGTGAACTTTTCTATTGAAGAAGGAAAAACACTTGGAGTCGTGGGAGAGTCCGGTTG CGGAAAATCAACAACGGGAAGAGTTATTTTACGATTGTTGGAAGCAACCGACGGAGAAATTTTATTTGAG GGAAAAAATATCCGAGAATACAGTAAGGCGGAAATGAATAAGCTACGTCAAGAAATGCAAATTATTTTCC AAGACCCTTTTGCGTCTTTGAATCCGAGAATGACTGTCAGTGAAATCATTGCAGAACCTTTGATTATTCA CAAGAAATGTAAGAATAAAAAGGAATTGGAAGAGAGAGTATTGGAATTAATGGAAACGGTCGGATTGAGC GAACGTCTTATCAATACCTATCCTCATGAATTGGATGGAGGAAGAAGGCAAAGAATTGGAATTGCCAGAG CTTTGGCATTGAAACCTAAATTTATTGTCTGCGATGAACCGGTATCGGCTTTGGACGTATCCATTCAGGC ACAGGTACTCAATTTAATGCAAGATTTACAAGAAAAATTAGGTTTGACCTATATGTTTATTACTCATGAT TTGTCTGTTGTAAAACATTTTTCCGATGATATTGCCGTGATGTATTTGGGAGAACTGGTGGAAAAAGCTC CGTCGAAAGAGTTGTTCAGAAATCCGATTCATCCGTATACCAAGGCATTGCTTTCTGCAATTCCGTCAAC AAATATCCGAAATAAAATGGAAAGAATTCGTTTGGAGGGAGAAATTACTTCTCCTATCAATCCGGAACCG GGATGTCGCTTTGCAAAGCGATGTGTCTATGCACAAGATATTTGTAGAAAAGAGAGTCCAAAATTGCAAG AAGTGCAAGGAGATCATTTCTTCGCCTGTCATCGTGCAGAAGAATTGGATTTTATAAAATAA

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