F. necrophorum 1_1_36S_FusoPortal_Gene_935

InterPro predicted function: "DeoR-type HTH domain;Schlafen
InterPro Accessions: IPR001034;IPR007421;IPR025831

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_935.out

Amino Acids: 442

ORF FASTA file - Amino Acids

MENNQLEYKSDIPKKPNQLKAEIVSFLNSHGGTILLGVDDDGNKIEHSEKRYKQWEEIIS NWIFSAFYPSVVNLIEIKIDKVFTISVKKGTNKPYYYKDGEGFNAKGVYIRVGSTKRLAN YEEIQRMMIASKSEEYEKLLSENQNLTFEYVRMKLKEKDIEFDSKGSSLLNTDGKYNNAA LFLSDQNPTISKFAVFQGTDVSIFLDKKEFTGSIMKQLDDILYFSNLSNKKKVIITGKPQ RDEYEDIPKRALREAICNCFCHRDYSLSGDIKVEYYDDRVMIFSPGSLPNGLTVEDIKDG MTAKRNQILVDALDKADFIENYASGVRRIFKDYEDYDKKPEYKISDNGVILTLYNRNYNA GDVPKNVPKNVPKNVPKKLKAKDRQMFIIEEMNINPKVTIMELGNKFNVSDKTIKRDIEK LKKENKIYRQGSLTEGRWIVIK

Coding DNA - Genome Coordinates: 969632-970960 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAAAACAATCAGTTGGAATATAAATCCGATATTCCTAAAAAGCCAAATCAATTAAAAGCAGAAATTG TATCCTTCCTTAATTCACACGGTGGAACTATATTACTTGGTGTAGATGATGATGGAAATAAAATAGAGCA TAGCGAAAAACGATACAAGCAGTGGGAAGAAATCATCAGTAATTGGATATTCAGTGCATTTTACCCAAGT GTTGTCAATTTGATTGAAATAAAAATAGATAAAGTGTTTACTATATCTGTCAAAAAAGGAACCAATAAGC CATATTATTACAAAGACGGAGAAGGATTTAATGCCAAAGGGGTGTATATTAGAGTAGGGAGTACAAAAAG GCTTGCAAACTACGAAGAAATACAAAGAATGATGATAGCCAGCAAATCGGAGGAATATGAAAAATTATTA TCCGAAAATCAAAATTTGACATTTGAATATGTGAGGATGAAATTAAAGGAGAAAGACATAGAGTTTGATT CGAAGGGGTCTTCATTATTGAATACCGATGGAAAATACAACAATGCAGCATTGTTTCTTAGTGATCAAAA TCCAACTATCAGTAAATTTGCAGTCTTCCAAGGAACTGATGTATCAATATTCTTAGATAAAAAAGAATTT ACCGGTTCTATTATGAAGCAATTGGATGATATTTTATACTTCTCAAATCTATCAAATAAAAAGAAAGTGA TCATAACAGGCAAACCACAAAGAGATGAGTATGAAGATATTCCTAAAAGAGCATTGAGGGAGGCAATATG TAATTGTTTTTGTCATAGAGATTATTCTTTGAGTGGAGATATAAAGGTGGAATATTATGATGACAGAGTA ATGATATTTTCTCCGGGTTCACTTCCGAACGGATTAACTGTAGAGGATATTAAAGACGGAATGACAGCAA AAAGAAATCAAATCCTTGTGGATGCTCTTGATAAAGCTGATTTTATAGAAAATTACGCATCAGGGGTTAG GCGAATATTTAAAGATTACGAAGATTATGATAAAAAACCGGAATATAAAATATCGGATAATGGAGTAATA CTCACCTTATACAACAGAAATTATAACGCTGGAGATGTCCCAAAGAATGTCCCAAAGAATGTCCCAAAGA ATGTCCCAAAGAAATTGAAGGCTAAAGACAGGCAAATGTTCATTATAGAAGAAATGAACATTAATCCAAA AGTTACAATTATGGAATTGGGCAATAAATTTAATGTATCCGACAAGACCATAAAAAGGGATATAGAAAAA TTGAAAAAAGAGAATAAGATTTACAGGCAAGGAAGTTTAACCGAAGGAAGATGGATTGTTATAAAATAA

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