F. necrophorum 1_1_36S_FusoPortal_Gene_980

InterPro predicted function: "NAD-dependent DNA ligase
InterPro Accessions: IPR013839;IPR004149;IPR001357;IPR004150;noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_980.out

Amino Acids: 673

ORF FASTA file - Amino Acids

MISKEKKEKRREELQKKLRSYSDAYYSQNESLISDYEYDMLLKELETLEAELQIADETSI TQKVGSSLKNTKFKKTAHRTPMLSLSNTYQIGEVEDFILRAKKNLNITENLEMEMEIKLD GLSISVIYEQGKLQRAVTRGDGVIGEDVTENVLQIETIPQELSEKLDIEIRGEIVLPFTE FETLNQMRIAKGEEVFANPRNAASGTLRQLDPQIVKERHLAAYFYFIVNAEQYGISSQKE SISFLEKLSLPTTKICEVFQNLQELEARISHWSVERENLPYETDGLVLKINHIAFWEKLG STGKSPRWAVAYKFPAKQVTTKLLDITWQVGRTGKITPVAELEEVELSGSRVKRASLHNY DEILRKDIRIGDTVFIEKAAEIIPQVIKAVKQDRTGEEKEIKAPEHCPICHSLLEKEEGL VDLKCGNKHCPGKIQGEMEYFVSRDGMNISGLGGKILEKFLELHYLEDVGDIYYLKEKKE ELEQLEKMGKKSIENLLTSIEESKNASYEKVLYALGIPFVGKVAAKLLAKESKNINQLQS MTEEDLKEIEGIGDKMARSIVEFFQNKRKKELIEKLRKVGLRFEETDKDTTAAKFLQGKT FLVTGTLSHYTRAELQEEIEKLGGSNLSSVSKKLDYLIVGEKAGSKLEKAKALGTVTILK EEEFLSFKEKLTK

Coding DNA - Genome Coordinates: 1020964-1018943 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGATTTCAAAAGAAAAAAAAGAAAAGAGGAGAGAGGAACTCCAAAAAAAACTGCGAAGCTATAGCGATG CCTATTATAGTCAAAATGAAAGTTTAATTTCAGATTATGAGTATGATATGTTATTAAAAGAATTGGAAAC CTTAGAAGCGGAATTACAGATAGCGGATGAGACTTCTATCACTCAAAAAGTAGGTTCCAGTTTGAAAAAT ACAAAATTTAAAAAAACGGCTCATAGGACTCCCATGTTAAGTTTGTCCAATACCTATCAAATTGGGGAAG TGGAAGATTTTATTCTTCGAGCCAAAAAAAATCTGAATATCACAGAAAATTTGGAAATGGAAATGGAAAT TAAACTGGACGGACTTTCGATCAGTGTCATCTATGAACAGGGAAAATTACAAAGAGCTGTAACGAGAGGA GACGGAGTGATAGGAGAAGATGTCACGGAAAATGTTCTACAAATTGAAACGATCCCTCAAGAGCTTTCTG AAAAACTGGATATTGAAATTCGAGGAGAAATTGTCCTTCCTTTTACAGAATTTGAAACACTAAATCAAAT GCGTATTGCAAAGGGAGAAGAAGTATTTGCAAATCCACGAAATGCAGCCAGCGGAACCCTTCGACAATTG GATCCGCAGATTGTAAAGGAACGACATTTGGCAGCTTATTTTTACTTTATTGTAAATGCGGAACAATATG GAATTTCCTCGCAAAAAGAAAGTATTTCATTCTTAGAGAAACTCTCTCTTCCCACTACAAAAATTTGTGA AGTTTTTCAAAATCTTCAGGAATTGGAAGCAAGAATTTCCCATTGGAGTGTGGAACGGGAAAATTTACCT TATGAAACCGACGGCTTGGTTTTAAAAATCAATCATATTGCCTTTTGGGAAAAATTGGGAAGTACGGGAA AAAGTCCTCGTTGGGCGGTTGCCTATAAATTTCCTGCCAAACAGGTAACGACAAAATTATTGGATATTAC TTGGCAGGTGGGCAGAACAGGAAAAATTACCCCTGTAGCGGAACTGGAAGAAGTAGAATTGTCCGGAAGT CGTGTCAAAAGAGCCAGCCTTCATAATTATGATGAAATTCTGAGAAAAGATATTCGAATCGGAGATACTG TTTTTATAGAAAAAGCGGCTGAAATTATTCCACAGGTTATCAAAGCGGTGAAGCAAGATAGAACCGGAGA AGAAAAAGAAATTAAGGCTCCTGAACATTGTCCGATTTGTCATTCTCTCTTGGAAAAAGAGGAAGGACTT GTAGATTTAAAATGTGGAAATAAACACTGTCCCGGAAAAATTCAAGGAGAAATGGAATATTTTGTTTCCA GAGACGGAATGAATATTTCCGGTTTGGGAGGAAAAATTTTAGAGAAATTTTTGGAACTGCACTATTTAGA AGATGTGGGAGATATTTACTATTTAAAAGAGAAAAAAGAAGAATTGGAACAGTTGGAGAAAATGGGAAAA AAGAGTATTGAAAATCTTTTGACCTCCATTGAAGAGAGTAAAAACGCCAGCTATGAAAAAGTTCTCTATG CTTTAGGGATTCCTTTTGTCGGAAAAGTTGCTGCAAAATTATTGGCAAAAGAGAGTAAAAATATCAATCA GCTTCAATCCATGACGGAAGAAGACTTAAAAGAAATAGAGGGAATCGGCGATAAAATGGCTCGCTCCATT GTAGAGTTCTTTCAAAACAAAAGGAAGAAGGAATTAATTGAAAAACTGAGAAAGGTCGGTCTTCGTTTTG AAGAAACAGACAAAGATACAACAGCAGCAAAATTTCTACAAGGAAAAACTTTTCTGGTGACAGGAACTCT TTCTCATTACACGAGAGCGGAATTACAGGAAGAAATTGAAAAACTGGGGGGAAGTAATCTAAGCTCCGTC AGTAAAAAACTTGACTATCTTATTGTGGGAGAGAAGGCGGGAAGCAAATTGGAAAAGGCAAAGGCACTGG GTACGGTGACAATCTTAAAGGAGGAAGAGTTCTTATCCTTTAAGGAAAAGTTGACGAAATAA

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