F. nucleatum 25586_FusoPortal_Gene_1856

InterPro predicted function: "RNA polymerase sigma factor 54 interaction domain;DNA binding HTH domain
InterPro Accessions: IPR002078;IPR002197;IPR001789

Link to full Interpro analysis


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Return to complete Genome Map of F. nucleatum 25586

FASTA file of all annotated F. nucleatum 25586 genes - Amino Acids | FASTA file of all annotated F. nucleatum 25586 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 25586_FusoPortal_Gene_1856.out

Amino Acids: 461

ORF FASTA file - Amino Acids

MKNAILAISEKKEILKQIRKELAEKYEVITFNNLLDAIDMVRESDFDLILLDNALEGISV GEAKKKLTSIGKDFITVALVDEINEAETKELEKFGIFAYLLKPIKIEDLDAIILPSLNGL ELIKENKRLEEKLSILEEDTDIIGQSAKIKDVRNLIEKIADSDLPVLIVGETGTGKDIIA KEIHRKSDRNKGKYAQVSCALYPGELIERELFGYERGAFLGANASKKGLLEEIDGGTIYI EDIAKMDIKVQSRFLKAIEYGEFKRVGGTKVRKSNVRFLVGTDIDLKQETEKGKFRKDLY HRLTALTIEVPPLRERKEDIPVLANYFLNKIVRILHKETPVISGEAMKFLMEYYYPGNIM ELKNLIERMALLSKDKILDVEQLPLEIKTKSDIVENKTVVGVGPLKEILEQEIYSLEEVE RVVIAIALQKTRWNKQETSKILGIGRTTLYEKIRKYGLDTK

Coding DNA - Genome Coordinates: 1984879-1983494 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAAAATGCAATATTGGCAATTTCAGAAAAGAAGGAAATACTAAAACAAATAAGAAAAGAATTAGCAG AAAAATATGAAGTGATTACCTTCAATAATTTATTAGATGCGATAGATATGGTAAGAGAAAGTGATTTTGA TTTAATACTACTAGACAATGCTTTGGAAGGAATCTCAGTAGGAGAAGCAAAGAAAAAATTAACAAGTATA GGAAAAGATTTTATAACAGTTGCTTTAGTAGATGAAATAAATGAAGCTGAAACAAAAGAATTGGAAAAAT TTGGAATTTTTGCATATTTGTTAAAACCAATAAAAATTGAGGATTTAGATGCAATAATTTTACCTTCACT TAATGGTTTAGAATTAATAAAAGAAAACAAGAGGTTAGAAGAAAAATTAAGTATATTAGAAGAAGATACT GATATTATAGGACAATCAGCAAAAATAAAAGATGTTAGAAATCTTATAGAAAAAATAGCTGATAGTGATT TACCTGTTTTAATAGTAGGAGAAACTGGAACTGGTAAAGATATAATAGCAAAAGAAATTCATAGAAAAAG TGATAGAAATAAAGGAAAATATGCCCAAGTTAGTTGTGCATTGTATCCAGGAGAACTTATTGAAAGAGAA TTATTTGGATATGAAAGAGGAGCTTTTTTAGGAGCTAATGCGAGTAAAAAAGGACTTTTAGAAGAAATTG ATGGAGGAACAATATACATTGAAGATATAGCTAAAATGGATATTAAAGTTCAATCAAGATTTTTAAAAGC AATTGAATATGGAGAATTTAAAAGAGTTGGTGGAACAAAAGTTAGAAAATCTAATGTAAGATTTTTAGTT GGTACAGATATAGATTTGAAACAAGAAACTGAAAAAGGAAAATTCAGAAAAGATTTATACCATAGATTAA CTGCATTAACTATAGAAGTTCCACCTTTAAGAGAAAGAAAAGAAGATATCCCTGTACTTGCTAACTATTT CCTAAATAAAATTGTTAGAATATTACATAAGGAAACTCCTGTTATTTCAGGGGAAGCTATGAAATTCTTA ATGGAATACTACTATCCAGGAAATATAATGGAACTTAAAAATTTAATTGAAAGAATGGCATTATTATCTA AGGATAAAATTTTAGATGTAGAACAATTACCATTGGAAATTAAAACAAAATCTGACATAGTAGAAAATAA AACAGTTGTAGGGGTTGGACCATTAAAAGAAATACTAGAACAAGAAATTTATAGTTTAGAAGAAGTAGAA AGAGTTGTAATTGCAATTGCGTTACAAAAGACTAGATGGAATAAACAAGAAACTTCTAAGATTTTAGGTA TAGGTAGAACAACTCTATATGAAAAAATAAGAAAATATGGTTTAGATACAAAGTAA

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