F. nucleatum 25586_FusoPortal_Gene_1997

InterPro predicted function: LacI-type HTH domain;Periplasmic binding protein
InterPro Accessions: IPR000843;IPR025997

Link to full Interpro analysis


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Return to complete Genome Map of F. nucleatum 25586

FASTA file of all annotated F. nucleatum 25586 genes - Amino Acids | FASTA file of all annotated F. nucleatum 25586 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 25586_FusoPortal_Gene_1997.out

Amino Acids: 333

ORF FASTA file - Amino Acids

MITQKELAARLGVSRTTIARAINNSPNIKPETKEKILKLVKELGYEKNYVGSLLASKKKI VYSFIVESRNSYYTEQIKLGIKGAKKEYKHYNLEIIEIVTNINKPMEQVLKLKKLLNSDK QIDGIIIIPLDKTKILELINPYLERIKFITVSVFLSKKIAYVGTDYQKCGRLAAELLTKT LNSNDKVLVIDNGDDNISSKYYLNGFLDRANNDKMNIVGPIKKNGVEESLQFLKTILKKE NISSIFINRYAQDILLELSDNILKRQKNITTGIGNRIRKLIMERKILATVADDVYSTGYK ACQLMVDMLYKEFGKSVKKIILEPQILLMENLK

Coding DNA - Genome Coordinates: 2159169-2160170 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGATAACACAAAAAGAACTTGCAGCCCGTTTAGGTGTTAGTAGAACAACCATAGCAAGAGCTATAAATA ACAGTCCTAATATAAAACCTGAAACAAAAGAAAAAATTTTAAAACTTGTAAAAGAATTAGGCTATGAAAA AAACTATGTTGGTAGTTTACTTGCAAGTAAAAAAAAGATAGTTTACAGCTTTATAGTAGAATCAAGAAAT AGTTACTATACAGAACAAATAAAACTTGGAATAAAAGGGGCAAAAAAAGAATATAAACACTATAATTTAG AGATTATAGAAATAGTTACTAATATAAACAAACCTATGGAACAAGTTTTAAAATTAAAAAAATTATTGAA TTCAGATAAACAAATAGATGGAATAATAATAATTCCATTGGATAAAACAAAAATTCTGGAATTGATTAAT CCGTATTTAGAAAGAATTAAATTCATCACAGTAAGTGTTTTTCTATCTAAAAAGATAGCTTATGTGGGAA CTGACTACCAAAAATGTGGTAGACTTGCAGCTGAATTATTAACAAAAACTTTAAATAGTAATGATAAAGT TTTAGTGATAGATAATGGAGATGACAATATATCATCTAAATATTATCTAAATGGTTTCTTAGACAGGGCA AATAATGACAAAATGAATATAGTTGGTCCTATTAAAAAAAATGGAGTAGAAGAATCTCTTCAATTTTTAA AAACTATTTTAAAAAAAGAAAATATCAGTTCAATATTCATAAATAGATATGCTCAAGATATTTTATTAGA ACTTTCTGATAATATTCTAAAAAGGCAAAAAAATATAACAACTGGTATAGGAAATAGAATAAGAAAATTA ATAATGGAAAGAAAAATACTAGCAACTGTTGCTGATGATGTTTACAGTACAGGATATAAGGCTTGTCAGC TTATGGTTGATATGCTTTATAAAGAATTTGGAAAAAGTGTTAAAAAAATAATTTTAGAACCACAAATTTT ACTTATGGAAAATTTAAAATAA

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