F. nucleatum 25586_FusoPortal_Gene_683

InterPro predicted function: "RNA polymerase sigma factor 54 interaction domain;DNA binding HTH domain
InterPro Accessions: IPR002078;IPR002197

Link to full Interpro analysis


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Return to complete Genome Map of F. nucleatum 25586

FASTA file of all annotated F. nucleatum 25586 genes - Amino Acids | FASTA file of all annotated F. nucleatum 25586 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 25586_FusoPortal_Gene_683.out

Amino Acids: 464

ORF FASTA file - Amino Acids

MLLLGFRLDNDLKLEFENNFENDLVFVENIMSFMEAIKSRKYEAIVIDERNSKEEALINL IVKVTEIQKKAVIIILGETSNWRIIAGSIKAGAYDYILKPELPRTIVRIVEKSVKDYKGL VERVDKTKSTGEKLIGRSKLMIDLYKVIGKVANNSAPVLVTGERGTGKTSVAKAIHQFSN VYDKPLISINCNSYRANLLERKLFGYEKGSFEGAAFSQYGELEKAEGGILHLANIESLSL DMQSKILFLLEENKFLRLGGMEPINAFVRIIASTSVNLEELIEKGLFIDELYRKLKVLEI DIPNLKERKEDIPFIIDHYMAECNQEMNKNIKGVTKVALKKIMRYDWPGNVNELKNAIKY AVAMCRGSSILIEDLPPNVVGEKILNGKEESKTVSIENLVKNEINQLRSKNKKRDYYFEI ISKIEKEIIKQVLEITNGKKVETAEILGITRNTLRTKMNYYDLE

Coding DNA - Genome Coordinates: 745158-746552 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGTTGTTATTAGGTTTTCGTCTTGACAATGACTTAAAATTAGAGTTCGAAAATAATTTTGAAAATGATT TAGTATTTGTAGAAAATATCATGTCTTTTATGGAAGCTATAAAAAGTAGAAAATATGAAGCAATAGTTAT AGATGAAAGAAATTCCAAAGAAGAAGCACTAATCAATTTAATTGTCAAAGTTACAGAGATTCAAAAAAAA GCAGTTATAATTATTTTGGGAGAAACTTCAAATTGGAGGATTATTGCAGGAAGTATAAAAGCTGGAGCCT ATGACTATATATTAAAACCAGAGCTACCTAGAACTATTGTAAGAATAGTAGAAAAATCAGTAAAAGATTA TAAAGGACTTGTAGAAAGAGTTGATAAAACTAAAAGTACAGGTGAAAAGTTAATAGGTAGAAGTAAACTT ATGATAGACCTTTATAAAGTTATTGGAAAGGTTGCAAACAATTCTGCACCAGTTTTAGTGACAGGAGAAA GAGGAACAGGAAAAACAAGTGTTGCTAAAGCAATACACCAATTCAGTAATGTTTATGATAAACCTCTTAT AAGTATAAATTGTAATTCATATAGAGCAAATTTATTAGAAAGAAAACTATTTGGTTATGAAAAAGGTTCA TTTGAAGGAGCTGCATTTAGCCAATATGGTGAATTAGAAAAAGCTGAGGGAGGAATACTTCATTTAGCAA ATATAGAATCCTTAAGCCTTGATATGCAATCAAAAATATTATTTTTATTGGAAGAAAATAAATTTTTGAG ATTGGGTGGAATGGAGCCAATAAATGCCTTTGTAAGAATAATAGCTTCTACAAGTGTGAATTTAGAAGAA CTTATTGAAAAAGGATTATTTATAGATGAGCTTTATAGAAAACTGAAAGTTTTAGAAATAGATATACCTA ATTTAAAAGAAAGAAAAGAAGATATACCTTTTATCATAGATCACTATATGGCAGAATGTAATCAAGAAAT GAATAAGAATATAAAAGGTGTTACTAAGGTAGCATTAAAAAAGATAATGAGATACGATTGGCCAGGTAAT GTAAATGAATTAAAAAACGCTATAAAATATGCAGTTGCAATGTGTAGGGGTTCTAGTATCTTAATAGAAG ATTTGCCACCTAATGTTGTTGGAGAAAAGATTTTAAATGGAAAAGAAGAATCTAAGACTGTATCTATTGA AAATCTTGTTAAAAATGAAATAAATCAATTAAGAAGTAAAAATAAGAAAAGAGATTATTATTTTGAAATA ATATCAAAGATTGAAAAAGAAATTATTAAACAAGTCCTTGAAATTACTAATGGCAAAAAGGTAGAAACAG CCGAAATTTTAGGTATTACAAGAAATACTTTAAGAACAAAAATGAATTATTATGATTTGGAGTAA

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