F. periodonticum 2_1_31_FusoPortal_Gene_895

InterPro predicted function: RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. periodonticum 2_1_31

FASTA file of all annotated F. periodonticum 2_1_31 genes - Amino Acids | FASTA file of all annotated F. periodonticum 2_1_31 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 2_1_31_FusoPortal_Gene_895.out

Amino Acids: 571

ORF FASTA file - Amino Acids

MNFLNFILSDVKKYSEVVSKVVNIDVEVMDSSFVRIAGTGNLEEKVGLSMRKESHIYHQV LKYKKTIIILNPRKDPHCSNCPNKSLCKEELEISTPIIYQDEVIGVIGLICFEKNKKYDF FIKKDLYIQFLEQIAEFISYKVYVYFSSLQLKRDNEILNSIIDRVQDIIILTNRKNQIEL INKKGLNVLGKIDKNEKIILKNSSSFLNQKEFNFLYSEKEISAIGDIFSFSLEKNEELNK KLFVFKEISEFKKYVLSFHENSSIILLESPQMQDIYSRISKVSKNDTSVIITGESGTGKE IIARHIHNLSTYSKGPFIIVNCGAIPESLIESELFGYTKGAFTGADPKGKIGFFEKANNG TIFLDEIGELPLQIQVKLLRVLQDKTITPIGSRTEKQINVRIIAATNKKLEEEIEKKNFR EDLFYRLNVFPINIPPLRERKKDIKILIDFFVKKYYISFQKERKDISENVYKLLMDYSWP GNIRELRNTIEYCMNMIEENETRIEPKHLPPKFLKNKEDLDDKKTLKEFEKENIINLIKI YGDNLEAKKIIAKSLGIGIATLYRKLKKYNL

Coding DNA - Genome Coordinates: 938142-936427 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAATTTTTTAAATTTTATTTTAAGTGATGTGAAAAAATATTCTGAAGTGGTTTCAAAAGTTGTAAATA TAGATGTAGAGGTTATGGACTCTTCATTTGTTAGAATAGCAGGAACAGGAAATTTAGAAGAAAAAGTTGG ACTTAGTATGAGGAAAGAGTCACATATATATCATCAAGTTTTAAAATATAAAAAGACCATTATAATTTTA AATCCAAGAAAAGATCCTCATTGTTCTAATTGTCCAAATAAATCTTTATGTAAAGAGGAATTAGAAATTT CAACACCTATTATATATCAAGATGAAGTTATTGGAGTCATAGGACTTATTTGTTTTGAAAAAAATAAGAA ATATGATTTTTTTATAAAGAAAGACTTATATATTCAATTTTTAGAACAAATTGCAGAATTTATTTCTTAT AAAGTTTATGTTTATTTTAGTAGTTTACAATTAAAAAGAGATAATGAAATTTTAAACAGCATAATTGATA GAGTTCAAGATATTATTATATTAACAAACAGAAAAAATCAAATTGAACTAATAAATAAAAAAGGACTTAA TGTGTTAGGAAAAATTGATAAGAATGAAAAAATAATTTTAAAAAACTCTTCGAGTTTCTTAAATCAAAAA GAATTTAATTTTTTGTACTCAGAAAAAGAAATTTCTGCCATAGGAGATATTTTCAGTTTTTCTTTAGAAA AAAATGAAGAATTAAATAAAAAGCTTTTTGTATTTAAAGAAATTTCTGAGTTTAAAAAATACGTGTTAAG TTTTCATGAAAATTCTTCTATTATCTTGTTAGAGTCACCCCAAATGCAAGATATTTATTCACGAATATCA AAGGTATCAAAAAATGATACTTCCGTTATAATCACTGGAGAAAGTGGAACAGGTAAAGAAATTATAGCCA GACATATACATAATTTAAGTACTTATTCAAAAGGACCTTTCATAATAGTAAATTGTGGTGCTATTCCTGA ATCATTAATTGAAAGTGAGCTTTTTGGTTATACAAAAGGTGCTTTTACTGGAGCAGACCCCAAAGGAAAA ATAGGTTTTTTTGAAAAAGCAAATAATGGGACTATTTTTCTAGATGAAATAGGAGAACTTCCTTTGCAAA TACAAGTAAAGTTATTAAGAGTTTTACAAGATAAAACTATTACTCCAATAGGATCACGTACAGAAAAACA AATTAATGTTAGGATTATTGCAGCAACCAATAAAAAATTAGAAGAAGAAATAGAGAAAAAAAATTTTAGG GAAGATTTATTTTATCGTTTAAACGTTTTTCCTATTAATATACCTCCACTAAGAGAAAGGAAAAAAGATA TTAAAATTCTTATAGATTTCTTTGTAAAAAAATATTATATTTCATTTCAAAAAGAGCGAAAAGATATTTC AGAAAATGTATATAAACTTTTAATGGACTATTCATGGCCAGGAAATATTAGAGAGTTAAGAAATACAATT GAATATTGTATGAATATGATAGAAGAAAATGAAACAAGGATTGAGCCAAAACATTTACCACCAAAATTTT TAAAAAATAAAGAGGATTTAGATGATAAAAAGACTTTAAAGGAGTTTGAAAAAGAAAATATTATAAATTT AATTAAAATTTATGGAGATAATTTGGAAGCTAAAAAAATTATTGCAAAATCTCTTGGAATTGGAATAGCA ACTCTATATCGAAAATTAAAAAAATATAATCTTTAA

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