F. ulcerans 49185_FusoPortal_Gene_1137

InterPro predicted function: RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. ulcerans 49185

FASTA file of all annotated F. ulcerans 49185 genes - Amino Acids | FASTA file of all annotated F. ulcerans 49185 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 49185_FusoPortal_Gene_1137.out

Amino Acids: 588

ORF FASTA file - Amino Acids

MEISLLDIKEHVKKYASAISSLINVDVGIVDKNMVRVTGTGLYKNIEGVYALGSVYKNSL ETGKTNIIENPRQHDLCTECLDKNKCREKLEIATPIYCRDEIVGVIGLVCFSDEQKKKIL SDIDSYLSFTKQIAEFIGIKFYEYQENLMQKDRESTLNTIIDNISKGVIISDCNDVIINI NNIASAKLKLKSGVLGKTMKLVSQNDYLMNEEVFNMVIENEEYNVAGKIIPLKSFNKTRS NAFVFEDVKKISRNILEMTSSDNMITLENIYGTSAATQSLKENIQKIANTNSTVLITGES GTGKELVARSLHSHGNRRNKPFVVINCSAIPDTLLESELFGYVKGAFTGASQNGRMGKFE LANTGVIFLDEIGDMPLYLQAKILRVIQEKKIERIGSNKSIDLDIKIIAATNVDLEKKIM EQKFRGDLYYRLNVIPIKLLPLRERKEDIIPIINSLIDKYNRLSDKYVHSIDEDVKKALI NYEWPGNVRELENVMELMISMSGSNGIISSDLLPDNILHHFDTAPSSVEELILNDKSELE DFEKIEKVYIEKSLEKYGDDTESKKYIADKMSIGLTTLYRKMKKYNIK*

Coding DNA - Genome Coordinates: 1263926-1265692 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAAATATCCCTGTTAGATATAAAAGAACATGTAAAAAAGTATGCAAGTGCTATATCAAGTCTGATAA ATGTTGATGTTGGTATAGTTGACAAAAATATGGTCAGAGTCACTGGAACTGGACTGTATAAAAATATTGA GGGAGTATATGCCTTAGGAAGTGTATATAAAAACTCTCTGGAAACTGGAAAAACTAATATAATTGAAAAT CCAAGACAGCATGATCTATGCACTGAATGTTTGGATAAAAATAAATGCAGAGAAAAACTTGAAATAGCTA CTCCTATTTATTGTCGTGATGAAATAGTAGGAGTTATTGGTCTTGTCTGTTTCAGTGATGAGCAGAAAAA AAAGATTCTTTCTGATATTGATTCTTATCTGAGTTTTACAAAACAGATAGCAGAATTTATAGGAATAAAA TTTTATGAATATCAGGAAAACCTTATGCAGAAAGACAGAGAATCTACTCTTAACACAATCATAGACAATA TCAGTAAGGGTGTTATTATCAGTGACTGTAACGATGTTATCATTAACATAAATAATATTGCTTCAGCTAA ATTGAAGCTAAAATCAGGTGTTTTAGGAAAAACTATGAAACTTGTGAGCCAGAATGACTATCTTATGAAC GAAGAAGTATTTAATATGGTGATAGAAAATGAAGAATATAATGTAGCAGGAAAAATAATTCCACTGAAAT CTTTCAATAAAACAAGAAGTAATGCTTTTGTTTTTGAAGATGTAAAAAAAATCAGCAGAAATATTCTTGA AATGACAAGCAGTGACAATATGATTACTCTGGAAAATATTTATGGAACTTCTGCTGCTACACAATCTCTC AAAGAAAATATTCAAAAAATAGCTAATACAAATTCTACTGTTTTGATTACAGGAGAAAGTGGAACTGGGA AAGAACTTGTAGCTCGTTCTCTTCATTCTCATGGCAACAGAAGAAACAAGCCTTTTGTTGTAATAAACTG TTCTGCTATTCCTGACACTCTCCTGGAAAGTGAACTTTTCGGATATGTGAAAGGAGCTTTTACTGGTGCC AGCCAAAACGGACGTATGGGAAAATTTGAACTTGCCAATACAGGGGTTATATTCCTAGATGAAATAGGAG ATATGCCTCTTTATCTTCAAGCTAAAATATTGAGAGTAATTCAAGAGAAGAAAATAGAACGTATAGGTTC TAATAAGAGTATTGATTTAGATATAAAAATAATTGCTGCTACCAATGTGGATCTTGAAAAAAAGATAATG GAACAGAAATTCAGAGGCGATTTGTATTACAGACTGAATGTTATTCCTATTAAGCTTCTTCCATTGAGAG AAAGAAAAGAAGATATCATTCCTATTATTAACAGTTTAATAGACAAATATAACAGACTTTCTGATAAATA TGTTCACTCTATAGATGAAGATGTAAAAAAAGCTCTTATCAACTATGAATGGCCTGGAAATGTAAGAGAA CTGGAAAATGTCATGGAACTTATGATAAGTATGAGTGGAAGTAATGGAATAATATCTTCAGACCTTCTTC CTGATAACATACTTCATCATTTTGATACTGCCCCTTCTTCAGTAGAAGAATTGATACTTAATGATAAATC TGAATTGGAAGATTTTGAAAAAATAGAAAAAGTCTATATAGAAAAATCTCTTGAAAAATATGGAGATGAC ACTGAAAGTAAAAAATACATAGCTGATAAAATGAGCATTGGACTTACTACTCTATATAGAAAAATGAAAA AATATAATATAAAGTAA

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