F. ulcerans 49185_FusoPortal_Gene_1620

InterPro predicted function: RNA polymerase sigma factor 54 interaction domain;RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR002078;noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. ulcerans 49185

FASTA file of all annotated F. ulcerans 49185 genes - Amino Acids | FASTA file of all annotated F. ulcerans 49185 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 49185_FusoPortal_Gene_1620.out

Amino Acids: 577

ORF FASTA file - Amino Acids

MEGILQQMQGIAQKYVDILSEILKIDVTIIDIRQIRIAGSGRMQERLGDMSSYGYIVKTC LESKKRIVLTNPEDSEICFSCPKKATCDNKSEVWQPLILDDKVIGALGFVCFNQKQKNHF EKNYNLFLKFLEQFSDLIVSKARDVIEFNRNKDVLLLFENVIDRVEMGMIVLNKEEEAVK INQLARKILHINEAGKKLPDILFSETGKKVLDLKEYQIQIENITYTAIGKFYDVELEDYK KVFLFQNAVYDEENILGINNSLQKRDIDKILGVSSKIMSIKEKIQIIAPSASSVFITGES GTGKELVATALHSESERKNFPFIAFNCASIPENLLESELFGYVKGAFTGADNKGRIGIFE AANGGTLFLDEVGDMPSYLQVKLLRVLERKEITRLGSNQVIKIDVRLIAATNKNMEELVT KGEFREDLYYRLNVIPIKLPPLRERKEDIKILAKNFIDKYSSILNKTVSGIDQNFWRKME EYSWPGNVRELQNSMEYVVNMMKYTEVINFRLLPHKVLGKHITIDEEENFNLEHMEKRMI EKLLNIYGYSPEAKQEIAKKLGIGIATLYRKIKVYEL*

Coding DNA - Genome Coordinates: 1777981-1779714 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAAGGAATTTTACAGCAGATGCAGGGGATAGCTCAAAAATATGTAGATATTTTGTCTGAAATTTTAA AAATCGATGTAACTATAATTGATATAAGGCAGATAAGAATAGCTGGAAGTGGAAGAATGCAAGAGCGATT GGGAGATATGTCGTCATATGGTTATATAGTTAAAACTTGTTTAGAAAGTAAAAAAAGAATTGTTTTAACT AATCCAGAAGATTCAGAAATATGTTTTTCTTGTCCTAAGAAAGCTACTTGTGATAATAAAAGTGAAGTAT GGCAGCCGCTTATTTTAGATGATAAAGTAATTGGTGCATTGGGATTTGTATGCTTTAATCAAAAGCAAAA GAATCATTTTGAAAAAAACTATAATTTATTTTTAAAATTTTTAGAGCAGTTTAGTGATCTTATAGTGAGT AAAGCAAGAGATGTAATAGAATTTAATAGGAATAAAGATGTACTTTTGCTATTTGAAAATGTAATAGATA GAGTAGAAATGGGAATGATAGTTCTCAATAAAGAAGAAGAGGCAGTAAAAATAAATCAGCTTGCAAGAAA AATATTACATATAAACGAAGCAGGGAAAAAACTGCCAGATATACTTTTTTCTGAAACTGGTAAAAAGGTT TTGGATTTAAAAGAATATCAAATTCAGATAGAAAATATAACATATACTGCTATAGGGAAATTTTATGATG TAGAGCTAGAAGATTACAAAAAAGTATTTCTCTTTCAGAATGCAGTATATGATGAAGAGAATATTTTAGG AATAAATAATTCTTTACAAAAACGTGATATTGATAAAATACTTGGGGTATCTTCTAAAATTATGAGTATA AAAGAAAAGATACAAATAATAGCCCCTTCTGCTTCAAGTGTATTTATAACAGGAGAAAGTGGAACTGGAA AAGAGTTAGTAGCTACAGCACTTCATTCTGAAAGTGAAAGAAAAAATTTTCCATTTATAGCATTTAATTG TGCTTCCATTCCTGAAAACTTATTAGAAAGTGAGTTATTTGGATATGTCAAAGGAGCTTTTACAGGAGCT GATAATAAAGGAAGAATAGGAATATTTGAAGCAGCAAATGGAGGAACTCTGTTTTTAGATGAAGTTGGAG ATATGCCATCATATTTACAAGTGAAATTACTGCGTGTTTTGGAAAGAAAAGAAATTACAAGATTGGGAAG CAACCAAGTAATAAAGATAGATGTAAGATTAATTGCTGCAACTAATAAAAATATGGAAGAATTAGTGACA AAAGGTGAGTTTAGGGAAGACCTGTACTATAGACTCAATGTCATTCCTATAAAGTTACCACCTTTGAGAG AAAGAAAAGAGGATATAAAAATATTAGCTAAAAATTTTATAGATAAATACAGCAGTATACTGAATAAGAC AGTGAGTGGTATAGATCAAAATTTCTGGAGAAAGATGGAAGAATATTCATGGCCTGGAAATGTAAGAGAG CTGCAAAATAGTATGGAATATGTAGTTAATATGATGAAATATACAGAAGTAATAAACTTCAGGCTGCTTC CTCATAAAGTTTTAGGAAAACATATTACAATAGATGAGGAAGAAAATTTTAATTTGGAACATATGGAAAA AAGAATGATAGAAAAACTTTTGAATATTTATGGATATTCACCAGAGGCAAAACAGGAAATAGCAAAGAAA TTAGGAATTGGAATAGCTACCTTATACAGAAAGATAAAAGTATATGAACTATAA

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