F. ulcerans 49185_FusoPortal_Gene_1734

InterPro predicted function: PAS domain;RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR000014;IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. ulcerans 49185

FASTA file of all annotated F. ulcerans 49185 genes - Amino Acids | FASTA file of all annotated F. ulcerans 49185 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 49185_FusoPortal_Gene_1734.out

Amino Acids: 504

ORF FASTA file - Amino Acids

MRERDSLEKIWKDIEKVFLKAMEKDKTVKEKYDFIYKEYQEFLNNYFDFKEIADNLFDGI YISNGEGKTLFINEAYTRITGITKEEIIGKNVRDILAKGDIYKGAVTLDVIKEKKRINNI GKIVKLDKDVLVTGSPIFDKYGNVELVVINNRDISELKDLENKIEKLKKTSLKVDEEIKF LRSRQMSNRKLIYKSEKMNSIFTLINTIAPTDVTVLITGESGTGKELVADEIFYKSFRKD KPFIKVNCAAIPSELLEAELFGYEGGAFTDSKKNGKIGMFELANEGTILLDEIGDMPIKL QTKLLRVLQQKEIMKLGGTQPIKLNIRIIASTNQNLKEQIKNGKFREDLFYRLNVVPIDI EPLRKRKEDIPELIFEFLNIFNKKYNKNTKIDKEAIELLVKYKWPGNIRELENFLERMVV INTTGIITVREVAPMIDSDDFFMEVSDYDLKKAVSYLEKRMISKALKNFGSTRKAAKHLG IDQSTVVKKCKSLEIDILKLKEYE*

Coding DNA - Genome Coordinates: 1902815-1904329 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAGGGAGAGAGATAGTTTAGAAAAAATATGGAAAGATATTGAAAAAGTATTTTTAAAAGCTATGGAAA AAGATAAAACAGTAAAAGAAAAATACGATTTTATCTACAAGGAATATCAGGAGTTTCTCAATAACTATTT TGATTTTAAAGAGATAGCAGATAATCTTTTTGATGGTATTTATATTTCTAATGGTGAAGGAAAAACTCTT TTTATAAATGAGGCTTATACAAGAATAACTGGGATAACAAAAGAAGAAATAATTGGAAAAAATGTCAGAG ATATATTGGCAAAAGGGGATATTTATAAAGGAGCAGTAACCTTAGATGTAATAAAAGAAAAAAAGAGAAT AAATAATATTGGAAAAATAGTTAAACTGGATAAAGATGTTTTAGTAACTGGAAGCCCAATATTTGATAAA TATGGAAATGTAGAACTTGTTGTTATAAATAATAGAGATATAAGTGAATTGAAAGATTTAGAAAATAAAA TTGAAAAATTGAAAAAAACATCTTTAAAAGTGGATGAAGAGATTAAGTTTTTAAGAAGCAGACAAATGTC TAATAGGAAACTTATATATAAAAGTGAAAAAATGAATTCTATATTTACTTTAATAAATACAATCGCTCCA ACAGATGTAACAGTTTTAATAACTGGAGAATCAGGGACAGGAAAGGAATTAGTAGCTGATGAGATTTTTT ATAAAAGTTTTAGAAAAGACAAGCCTTTTATTAAAGTGAATTGTGCTGCTATTCCAAGTGAATTATTAGA AGCAGAATTGTTTGGATATGAAGGGGGAGCATTTACAGATTCTAAGAAAAATGGAAAGATAGGAATGTTT GAGTTGGCAAACGAAGGAACTATTCTATTGGATGAAATAGGGGATATGCCGATAAAACTACAGACAAAAC TTTTAAGAGTTCTTCAACAAAAAGAAATTATGAAACTGGGAGGAACACAGCCGATAAAATTAAATATAAG AATTATAGCTTCTACTAATCAAAATTTGAAAGAACAGATAAAGAATGGAAAATTCAGAGAAGATTTGTTT TATCGATTGAATGTAGTTCCAATAGATATAGAACCATTAAGAAAAAGAAAAGAGGATATACCAGAGCTAA TATTTGAATTTTTAAATATATTCAATAAAAAATATAATAAAAATACAAAAATAGATAAAGAGGCTATAGA ACTTTTAGTAAAATATAAATGGCCTGGAAATATCAGAGAATTAGAAAATTTTCTTGAAAGAATGGTAGTA ATAAATACAACTGGAATAATAACTGTAAGAGAAGTAGCTCCAATGATAGATAGTGATGATTTTTTTATGG AAGTAAGTGATTATGATTTAAAAAAAGCAGTATCCTATCTGGAGAAAAGGATGATAAGTAAAGCTTTAAA AAATTTTGGCTCAACAAGAAAGGCGGCTAAACACTTAGGGATTGATCAATCAACAGTGGTAAAAAAATGT AAAAGTTTAGAGATAGATATTCTTAAATTAAAAGAATATGAGTGA

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