F. ulcerans 49185_FusoPortal_Gene_1907

InterPro predicted function: "RNA polymerase sigma factor 54 interaction domain;DNA binding HTH domain
InterPro Accessions: IPR002078;IPR002197

Link to full Interpro analysis


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Return to complete Genome Map of F. ulcerans 49185

FASTA file of all annotated F. ulcerans 49185 genes - Amino Acids | FASTA file of all annotated F. ulcerans 49185 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 49185_FusoPortal_Gene_1907.out

Amino Acids: 586

ORF FASTA file - Amino Acids

MSKLKNIENHVKKYANIISNVIEAEVEIVDADLVRIAGTGLFQDKNNEIVSGVVYKEVIN TKKSLLITEPRKHELCKKCNYKKECKEKLELSSPILYKDEVIGVIGLICTTDLQKNKVLS NLDSYLKFLEQIGDFISGKVYEYQNEIKTQEVNDVFKQILNNMDKCVLSLDANNYIVNAN KPAMKTMKLGADYTSKQVNIVSKKLTILGKDIFEMTIDDKYFNMVGVSIPISSINEKAYT IFIFDNVNTDIPKSTKGNNESSALDAIIGESEVMQSLKNKIRKVADTKSTVLITGKSGTG KELVARAIHDSGERRNRPFIAINCGAIPDSLLESELFGYVKGAFSGASSEGRVGKFELAN TGDIFLDEIGEMPYSLQVKLLRVLQERTLVRIGSNKLINLDLRVIAATNMDLKKMVEENK FREDLYYRLNVIPIEIPPLCERDHDLFLIIDKLIEKYNNIFNKYVHTIDDDVKEILKNYS WPGNVRELENIIEFMVNMADDSGRITKTMLYDNILKNKENVKSSKVISLNDSDDICTIEE MEKVMIKKALDLYKDDSNCKNKAADRLGIGIATLYRKIDKYKLNEV*

Coding DNA - Genome Coordinates: 2091768-2090008 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGTCTAAACTAAAAAATATAGAAAATCATGTAAAAAAGTATGCTAATATAATATCTAATGTAATTGAAG CAGAAGTAGAAATAGTTGATGCTGATCTTGTAAGAATAGCTGGAACTGGTTTATTTCAAGATAAAAATAA TGAAATAGTAAGTGGTGTTGTATATAAAGAAGTAATTAATACTAAAAAAAGTCTTTTAATTACAGAGCCT AGAAAACATGAACTTTGTAAAAAATGTAATTATAAAAAAGAATGTAAAGAAAAGCTGGAGCTCTCTTCTC CTATATTATATAAAGATGAAGTAATCGGAGTAATTGGACTTATATGTACTACGGATTTACAAAAAAATAA AGTTCTTAGCAACCTTGACTCTTATCTTAAGTTTCTTGAACAAATAGGTGACTTTATATCTGGAAAAGTA TATGAATATCAAAATGAAATAAAAACTCAAGAAGTGAATGATGTTTTCAAACAAATATTAAATAATATGG ATAAATGTGTCCTTTCTTTAGATGCTAATAATTACATCGTCAATGCAAATAAACCTGCAATGAAAACTAT GAAGCTAGGAGCAGACTATACTTCAAAGCAGGTAAATATTGTTTCTAAAAAACTTACTATTCTTGGAAAA GATATATTTGAAATGACAATTGATGATAAATATTTTAATATGGTTGGAGTTTCAATTCCGATATCTTCAA TAAATGAAAAAGCCTATACTATATTTATCTTTGATAATGTAAATACTGATATTCCCAAAAGTACAAAGGG AAATAATGAATCATCAGCTTTAGATGCTATAATTGGGGAATCTGAAGTAATGCAAAGTTTGAAAAATAAA ATAAGAAAAGTGGCAGATACTAAATCTACTGTCCTTATCACTGGAAAAAGCGGAACTGGAAAAGAATTAG TAGCCAGAGCCATTCATGACAGCGGTGAAAGAAGAAACAGACCTTTTATAGCAATCAACTGCGGTGCTAT TCCTGACTCTCTTTTAGAAAGTGAGCTCTTTGGTTATGTAAAAGGTGCATTTAGTGGTGCCAGTTCAGAA GGTAGAGTAGGAAAATTTGAACTTGCCAATACTGGAGATATATTTCTGGATGAGATAGGGGAAATGCCAT ACTCTTTACAGGTAAAACTTCTAAGAGTATTACAGGAAAGAACTTTGGTAAGAATAGGATCAAACAAGCT TATTAATCTAGATCTCAGAGTAATAGCTGCTACTAATATGGATTTAAAAAAAATGGTAGAGGAAAATAAA TTCAGAGAGGATCTATATTATAGATTAAATGTAATTCCTATTGAAATTCCCCCTCTTTGCGAAAGAGACC ACGACCTTTTCCTTATCATTGATAAGCTTATAGAAAAATACAACAACATTTTCAATAAATATGTTCATAC AATAGATGATGATGTAAAAGAGATATTAAAAAATTATTCATGGCCTGGAAATGTCAGAGAACTTGAAAAC ATTATAGAATTTATGGTAAATATGGCTGATGATTCTGGAAGAATAACTAAAACTATGCTTTATGACAATA TCTTAAAGAATAAAGAAAATGTAAAAAGTAGTAAAGTTATTTCTCTCAATGACAGTGATGATATATGTAC CATTGAAGAAATGGAAAAAGTTATGATAAAAAAAGCTTTAGACCTGTATAAGGATGATTCAAACTGTAAA AACAAAGCTGCTGATAGACTTGGTATAGGAATTGCAACTCTCTATAGAAAAATAGACAAATATAAATTAA ATGAAGTGTAA

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