F. ulcerans 49185_FusoPortal_Gene_2165

InterPro predicted function: "RNA polymerase sigma factor 54 interaction domain;DNA binding HTH domain
InterPro Accessions: IPR002078;IPR002197

Link to full Interpro analysis


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Return to complete Genome Map of F. ulcerans 49185

FASTA file of all annotated F. ulcerans 49185 genes - Amino Acids | FASTA file of all annotated F. ulcerans 49185 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 49185_FusoPortal_Gene_2165.out

Amino Acids: 464

ORF FASTA file - Amino Acids

MELIKNLFGEKGYIDGITIIDTKGEILFTVKFNSKLNNNSEGYEVIGKNFYEIYENLSGN KSSMYRAMELEMPIYVKNQKLKPRNHKEILISSLSIPIKSGGRVVGAIDLSSEEITDPKR FEKDTEISLDELKKINLKDLSLNKNGARYTLDDIITNNFEMKQLKEFIKTISDSYLPVMI YGETGTGKELFAQAIHNESKRKDKPFIAQNCAAIPENLLESIFFGTAKGAFTGAVDSPGL LETADGGTIFLDEINSMPMNLQSKLLRALQENKIRRIGAKDVIDINVKIIAALNKDPMKA IEDNELRMDLYYRLSVLNITIPPLRERKDDISVLVNYFVAKYNELLEKNVRYISSEICQT FQTYDWPGNIREIEHIVAFGMSVIRPDEEKLEFSDLERKWIEITGKKKQKTELPVKDLKT MVEEYEKNVIEKVLEMSMHNISKASLILKIPRQTLQRKIKQYEL*

Coding DNA - Genome Coordinates: 2384568-2385962 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAACTTATAAAAAATCTTTTTGGGGAAAAAGGTTATATCGATGGAATAACAATTATAGACACAAAAG GGGAAATACTTTTTACAGTTAAATTTAATAGTAAACTTAATAACAATAGTGAAGGTTATGAAGTAATAGG AAAAAATTTCTATGAAATATATGAAAATCTTTCTGGAAATAAAAGCAGCATGTATAGAGCTATGGAATTG GAAATGCCCATATATGTTAAAAATCAAAAATTAAAGCCTAGAAATCATAAAGAAATATTAATTTCTTCAT TATCAATACCAATTAAGTCAGGAGGCAGGGTAGTAGGAGCCATTGATTTATCCTCTGAAGAGATAACTGA TCCTAAAAGATTTGAAAAAGATACTGAAATAAGCTTAGATGAATTAAAAAAAATAAATTTAAAAGATCTT TCTTTAAATAAGAATGGGGCGAGATATACTCTTGATGATATTATAACTAACAACTTTGAAATGAAGCAAT TGAAAGAATTTATAAAAACGATATCTGATTCATATCTTCCAGTAATGATTTATGGAGAAACTGGAACTGG AAAAGAGCTTTTTGCTCAGGCTATACATAATGAAAGTAAAAGAAAAGATAAGCCTTTTATTGCTCAAAAC TGTGCAGCTATACCAGAAAACCTTCTTGAAAGTATATTCTTTGGGACAGCTAAGGGAGCATTTACAGGGG CAGTAGACAGTCCGGGACTTTTAGAGACAGCAGATGGGGGAACTATTTTTTTAGATGAAATCAACTCTAT GCCTATGAATTTGCAGTCTAAATTATTGAGAGCCCTACAGGAGAATAAAATAAGAAGAATAGGAGCAAAG GATGTAATAGATATCAATGTAAAAATAATTGCAGCTTTAAATAAAGATCCTATGAAAGCAATAGAGGACA ATGAATTAAGGATGGACCTTTACTATAGACTGAGTGTTTTAAATATAACTATTCCTCCATTAAGAGAGAG AAAAGATGATATCTCTGTTCTTGTAAATTATTTTGTAGCTAAATATAATGAACTTCTTGAAAAGAATGTA AGATATATTTCCAGTGAAATATGCCAGACATTCCAGACATATGACTGGCCGGGAAATATAAGAGAGATAG AGCATATAGTAGCTTTTGGTATGAGTGTTATAAGACCAGATGAGGAAAAACTTGAATTTTCAGATTTAGA AAGAAAATGGATAGAGATAACAGGAAAGAAAAAGCAGAAAACAGAGCTTCCTGTTAAAGATTTGAAAACA ATGGTAGAGGAATATGAAAAAAATGTAATAGAAAAAGTTTTGGAAATGTCTATGCACAATATATCAAAGG CTTCATTAATATTAAAGATACCAAGACAAACTTTACAAAGAAAAATAAAACAATATGAATTGTAG

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