F. ulcerans 49185_FusoPortal_Gene_3166

InterPro predicted function: PAS fold;RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR013767;IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. ulcerans 49185

FASTA file of all annotated F. ulcerans 49185 genes - Amino Acids | FASTA file of all annotated F. ulcerans 49185 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 49185_FusoPortal_Gene_3166.out

Amino Acids: 489

ORF FASTA file - Amino Acids

MDHKEDGLLFREKIESESLKDEIIENRYINKMMKSIVDSSYDGIYVTDGEANTLLVNKSY GRITGLNIEDLIGKNMRDLVEAGVYDNSGSLVVIETGKEATVNQKLSSGKEVLVTSVPVF DEDGKRKYIVTNVRDLSDIERLRRELFLNQNLTQKYKDELENMKEQLVDIDDITFKDKSM FNTLKMILKISKMDTSVLLTGETGTGKTHIAKLIHKYSNRNEQTFIEINCGAIPESLIES EFFGYEAGAFTGASKKGKMGVFELANNSTLFLDEISELNIDLQVKLLKVLESLEVRRIGG ERVIQTNARIIAATNRDLRELVKEGKFREDLYYRLNVISINIPSLKERKDDIVPLCLRFL KEFNKKYDVEKFFSQEIIEVFYRYQWPGNIREMKNLIEQLVIISQGNEVSTDYLPKYIFQ KGALELGSDKTGVIEELYQYHKMSLKEATLKFQQNLIKNMLKEKGSQRQVAKALQVDPAT ITRKLAGQE*

Coding DNA - Genome Coordinates: 3462389-3460920 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGATCATAAGGAAGATGGGTTGTTGTTCAGGGAAAAAATAGAATCAGAATCTTTAAAAGATGAGATTA TAGAAAATAGATACATTAATAAGATGATGAAATCCATAGTGGACTCATCTTATGATGGGATTTATGTAAC TGATGGAGAGGCAAATACTCTTCTGGTAAATAAATCCTATGGACGTATTACAGGATTGAATATAGAGGAC CTTATTGGGAAAAATATGAGAGATTTAGTAGAGGCAGGAGTATATGACAATTCTGGGTCTCTTGTAGTGA TAGAAACTGGAAAAGAAGCTACAGTAAATCAGAAGCTTTCCTCTGGAAAAGAAGTGCTTGTAACAAGTGT ACCAGTATTTGATGAAGATGGAAAAAGAAAATATATCGTGACTAATGTAAGGGATTTGTCAGATATAGAA AGACTAAGAAGAGAATTGTTTCTGAATCAGAATCTGACACAGAAATATAAAGATGAGCTGGAAAATATGA AAGAACAGCTGGTAGATATAGATGATATAACATTTAAAGACAAATCTATGTTCAATACTTTGAAAATGAT ATTGAAGATATCAAAGATGGATACTTCTGTCCTTCTTACAGGAGAGACAGGAACTGGAAAAACACATATA GCCAAGCTGATACATAAATACAGCAACAGAAATGAACAGACATTTATTGAGATAAATTGTGGAGCTATTC CAGAAAGCCTTATAGAATCAGAATTTTTTGGATATGAGGCAGGAGCTTTTACTGGAGCATCAAAAAAAGG AAAAATGGGAGTTTTTGAACTTGCCAATAATTCTACTTTGTTTTTGGATGAGATATCAGAGCTGAATATA GATTTGCAGGTAAAACTGCTGAAAGTATTGGAAAGTCTGGAAGTAAGGCGTATAGGTGGGGAGAGAGTTA TACAGACAAATGCAAGGATAATAGCTGCAACAAACAGAGATTTAAGAGAATTAGTAAAAGAGGGAAAATT CAGAGAAGATTTGTATTACAGACTTAATGTGATATCTATAAATATTCCATCTTTAAAAGAGAGAAAAGAT GATATAGTACCTCTTTGTTTAAGGTTTCTGAAAGAATTTAATAAGAAATATGATGTGGAAAAATTTTTCA GTCAGGAGATAATAGAGGTATTTTATAGGTATCAATGGCCTGGAAATATTAGAGAGATGAAAAATCTTAT AGAACAGCTTGTAATTATATCTCAAGGAAATGAAGTATCTACTGATTATCTTCCAAAATATATTTTTCAA AAGGGAGCTTTAGAATTAGGAAGTGACAAAACAGGAGTAATAGAGGAACTTTATCAGTATCATAAAATGA GTTTAAAGGAAGCAACACTCAAATTTCAGCAGAATCTTATAAAAAATATGCTCAAAGAAAAAGGTTCTCA AAGACAGGTAGCCAAAGCATTACAGGTAGATCCTGCTACAATTACAAGAAAACTTGCAGGACAGGAATAA

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