F. necrophorum 1_1_36S_FusoPortal_Gene_1989

InterPro predicted function: Bacterial transcriptional activator domain
InterPro Accessions: IPR005158

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_1989.out

Amino Acids: 383

ORF FASTA file - Amino Acids

MLKIKFLGKVMIEQENLSITENLGAKALALLSLLILYYPRSMQRDKLITYLWPDSSEESG KYNLRFNLWKINSSIGKDQNGNKFLYVGRNDCRINQNYKYECDILNIKKKVPYQMASISE LENMRSILNGDFMEGFYFKNCNEYNEMIIAERNYYENQKIKILFRLIELYQKQRNFFLCE KIIKEFIILEPYDEEIALKIMEIYEENGKRSSAILFYKEFQKKLMISLGIQPSRELKQKY FSLKNMGESKNSSQSGINIQEKKRGYGRGNKVYLELSTTCISKLKYYWITSFLESLEDKI DFDFYISEIEKRDLGFIFSPFQKEGFSEQIPDVRIASAFLHLLGKLKIDYSIHVHIENYE DMDFFSSSLIKIVNQRKLLHILL

Coding DNA - Genome Coordinates: 2119606-2118455 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGTTAAAAATAAAATTTCTCGGAAAAGTAATGATTGAGCAAGAAAATCTTAGCATTACAGAAAATCTTG GAGCAAAGGCCTTAGCTCTCTTAAGTTTATTGATATTATATTATCCAAGATCAATGCAACGGGATAAATT GATAACATATTTATGGCCGGATAGTTCCGAAGAATCAGGAAAATATAATCTCAGGTTTAATTTATGGAAA ATCAATAGTAGTATTGGAAAAGATCAAAATGGAAATAAATTTTTATATGTAGGAAGAAATGACTGTAGAA TTAACCAGAATTATAAGTATGAATGCGATATCTTAAATATAAAGAAAAAAGTTCCCTATCAAATGGCATC TATCAGTGAATTGGAAAATATGAGAAGTATTTTAAATGGCGATTTTATGGAGGGATTTTATTTTAAAAAT TGTAATGAATATAATGAGATGATTATAGCAGAAAGAAATTACTATGAAAATCAGAAAATAAAAATATTAT TTCGTTTGATAGAATTGTATCAAAAACAGAGGAATTTTTTTTTATGTGAAAAGATTATAAAAGAATTTAT AATCTTAGAACCTTATGATGAAGAAATTGCATTAAAAATCATGGAAATTTACGAAGAAAATGGAAAAAGA AGTTCTGCAATTTTATTTTACAAAGAGTTTCAGAAAAAATTGATGATATCATTAGGAATTCAACCTTCTA GGGAGTTGAAACAGAAATATTTTTCTTTAAAAAATATGGGAGAATCAAAAAATTCTTCTCAATCTGGTAT AAATATTCAAGAGAAAAAGAGGGGATATGGGAGAGGAAATAAAGTTTATCTTGAGCTCTCAACTACTTGT ATCAGTAAGTTAAAATATTACTGGATTACCAGTTTTTTAGAAAGTTTGGAAGATAAAATAGATTTCGATT TTTATATAAGTGAGATAGAAAAAAGAGATTTGGGATTTATTTTTTCCCCTTTTCAAAAAGAGGGATTTTC AGAACAAATACCGGATGTTAGAATAGCAAGTGCTTTTCTGCACCTATTAGGAAAACTTAAAATAGATTAT TCTATTCATGTACATATCGAAAACTATGAAGATATGGATTTTTTTTCTTCTTCTTTGATAAAAATAGTCA ATCAGAGAAAATTACTTCATATTCTTTTGTAA

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