F. necrophorum 1_1_36S_FusoPortal_Gene_394

InterPro predicted function: "RNA polymerase Rpb2
InterPro Accessions: IPR007642;IPR007641;IPR007645;IPR007644;IPR007120;IPR019462

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_394.out

Amino Acids: 1184

ORF FASTA file - Amino Acids

MGKLVERLNFGKIKERGIMPHFLEFQLNSYEDFLQMKVAPNNRENKGLESAFREIFPIES SSNGEIRLEYVSYELHAAEPPLNDELECKKRGKTYSDSLKVRLRLFNKKSGNEIQESLVY FGEVPKMTDRGTFIINGAERVVVSQLHRSPGVSFNKEVNIQTGKDLFSGKIIPYKGTWLE FETDKNDFLSVKIDRKKKVLATVFLKAVDFFKDNIEIKEHFFEEKELNLSEFYEKYTHDP GELLSVVRTKIENSFVKEAIFDEETGEIIAEEDAVISEALISKMIENKVSTISYWEVKPE DILIANTIANDTTKNSDEAVTEVFRKLRPGDLVTVDSARSLIKQMFFNVQRYDLEPVGRY KMNKRLKLEIDENEVLLTPEDVLGTIQYVIDLNNGESHVHTDDIDNLSNRRVRGVGELLL MQIKTGLLKMSKMVREKMTIQDIETLTPQSLLNTRPLNALILDFFGSGQLSQFMDQSNPL AELTHKRRISALGPGGLSRERAGFEVRDVHDSHYGRICPIETPEGPNIGLIGSLAIYAKI NQYGFIETPYIAVKDGIADLNDIRYLAADEEEGMFIAQADTKLGEHNELLEPVTCRIGPE ILDVDAKRVHYLDISPKQVVSVSAGLIPFLEHDDANRALMGSNMQRQAVPLLRTEAPFIG TGLERKVAVDSGAVVTTKVDGKVSYVDGKKIVIETEDKREYTYRLLNFERSNQSMCLHQS PLVNLGDEVKAGDIIADGPATSKGDLALGKNILMGFMTWEGYNYEDAILISDRLRKDDVF TSVHVEEYEIEARNTKLGDEEITREIPNVSEAALRNLDANGVIMIGSEVEPGDILVGKTS PKGETEPPAEEKLLRAIFGEKARDVRDSSLRMPHGSKGTVVEILELSRENGDELKAGVNK AIRVLVAEKRKITVGDKMSGRHGNKGVVSRVLPAEDMPFLEDGTHLDVVLNPLGVPSRMN IGQVLEVHLGMAMRSLNGGTHIATPVFDGATEEQIKDYLENQGHPRSGKVTLYDGRTGDK FDNKITVGIMYMLKLHHLVEDKMHARAIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEA YGASNILQEMLTVKSDDVTGRTKTYEAIIKGEEMPDSDLPESFKVLLKEFQALALDVELC DENDNVINVDEELNKEETTLEYSPSDILEMEEYEDEDDYEDEEE

Coding DNA - Genome Coordinates: 404514-408068 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGGGAAACTCGTTGAACGATTGAATTTTGGAAAAATTAAAGAAAGAGGAATTATGCCTCATTTTCTTG AATTTCAATTAAATTCCTATGAAGATTTCTTACAAATGAAAGTGGCTCCCAACAATAGAGAAAACAAAGG GTTGGAGTCCGCTTTTCGAGAAATTTTTCCGATTGAATCATCTTCTAACGGAGAAATTCGATTAGAATAT GTATCTTATGAATTGCATGCTGCAGAACCGCCTTTAAACGATGAATTGGAATGTAAAAAGAGAGGGAAGA CCTATTCCGATTCTTTGAAGGTGAGACTGCGACTGTTTAACAAAAAAAGTGGAAATGAGATTCAGGAATC TTTGGTTTACTTTGGGGAAGTTCCTAAGATGACCGATCGAGGGACTTTTATCATCAATGGAGCGGAAAGA GTTGTGGTTTCACAATTGCATCGTTCTCCCGGAGTATCCTTCAATAAAGAGGTAAATATTCAAACCGGGA AAGATCTTTTCTCCGGAAAGATTATTCCGTATAAAGGAACTTGGCTGGAATTTGAAACGGATAAAAATGA CTTTCTGAGTGTAAAAATTGACAGAAAGAAAAAAGTTTTAGCAACAGTGTTCCTAAAGGCTGTGGATTTT TTCAAAGACAATATTGAAATCAAAGAACATTTCTTTGAAGAAAAGGAATTGAATTTAAGTGAATTTTATG AGAAATATACCCATGATCCGGGAGAATTATTAAGCGTTGTCCGAACTAAAATTGAAAACAGTTTTGTGAA AGAAGCTATTTTTGATGAAGAAACAGGGGAAATTATTGCAGAAGAAGATGCCGTCATTTCAGAGGCTCTT ATTTCAAAAATGATAGAAAATAAAGTTTCTACAATTAGTTATTGGGAAGTAAAACCGGAAGATATTTTGA TTGCCAATACCATTGCCAACGATACGACGAAAAATTCAGATGAAGCCGTAACCGAAGTTTTTAGAAAATT GAGACCGGGAGATTTGGTAACGGTAGATTCTGCGAGAAGTTTAATCAAACAGATGTTCTTTAACGTACAA CGTTATGATTTGGAGCCTGTGGGACGTTATAAAATGAACAAGAGATTGAAATTGGAAATCGATGAAAATG AAGTGTTATTGACTCCGGAAGATGTTTTGGGAACGATACAATATGTCATTGATTTAAATAATGGGGAATC TCATGTCCATACCGATGATATTGACAATTTGTCCAACCGTCGTGTCAGAGGAGTTGGAGAATTGCTATTG ATGCAAATTAAGACGGGACTTCTAAAAATGTCAAAAATGGTTCGAGAAAAAATGACCATTCAGGATATTG AAACCTTGACTCCACAATCTCTGTTGAATACAAGACCTTTGAATGCTTTGATTTTAGATTTCTTCGGGTC CGGGCAATTGTCTCAATTTATGGATCAGTCGAATCCTCTAGCAGAATTAACTCACAAGAGAAGAATTTCC GCCTTAGGTCCCGGAGGACTTTCCAGAGAAAGAGCCGGATTCGAGGTGCGTGACGTACACGATTCTCACT ATGGAAGAATTTGTCCGATAGAAACGCCGGAAGGACCGAACATCGGATTGATCGGATCTTTGGCTATCTA TGCTAAAATCAATCAATATGGATTTATTGAAACACCGTATATCGCAGTCAAAGACGGAATTGCGGATTTG AATGATATTCGATATTTGGCAGCCGATGAGGAAGAAGGAATGTTCATCGCTCAAGCCGATACGAAGTTGG GAGAACATAATGAATTGTTGGAACCGGTAACCTGCCGAATCGGACCGGAAATTTTGGACGTGGATGCGAA AAGAGTTCATTATTTGGATATTTCTCCCAAACAAGTGGTATCAGTCTCTGCCGGATTGATTCCCTTCCTG GAACATGACGATGCCAACCGGGCATTGATGGGATCAAACATGCAAAGACAAGCCGTTCCTTTACTACGAA CGGAGGCTCCTTTTATCGGAACCGGTTTGGAAAGAAAGGTAGCGGTTGATTCCGGAGCTGTGGTAACGAC AAAGGTGGACGGAAAAGTAAGTTATGTGGACGGAAAGAAAATTGTAATTGAAACGGAAGATAAGAGAGAA TATACTTATCGTCTATTAAATTTTGAACGTTCGAATCAATCCATGTGTTTACATCAATCTCCATTGGTAA ATTTAGGAGATGAAGTGAAAGCCGGAGACATTATTGCGGATGGACCGGCAACCAGCAAGGGAGATTTGGC TTTAGGAAAAAATATCCTAATGGGATTCATGACTTGGGAAGGATACAACTACGAAGATGCGATTTTGATT TCAGATCGGCTACGAAAGGACGATGTTTTTACTTCCGTTCATGTGGAAGAATATGAAATCGAAGCGAGAA ATACCAAATTGGGAGATGAAGAAATCACTCGTGAGATTCCGAATGTTTCCGAAGCGGCTCTTAGAAACTT GGATGCCAATGGAGTTATTATGATTGGATCGGAAGTGGAGCCGGGAGATATTTTGGTCGGAAAGACTTCT CCAAAGGGAGAAACGGAACCTCCGGCAGAAGAAAAATTACTGAGAGCTATTTTCGGGGAAAAAGCGAGAG ATGTTCGAGACAGTTCTCTACGTATGCCTCACGGATCAAAAGGAACGGTTGTGGAAATTTTAGAATTGTC TCGTGAAAACGGAGATGAGTTGAAAGCCGGAGTGAATAAGGCAATTCGCGTGTTAGTGGCAGAAAAAAGA AAAATTACCGTTGGGGATAAAATGTCAGGTAGACATGGAAACAAAGGGGTTGTTTCGAGAGTGTTGCCGG CGGAAGACATGCCTTTCTTAGAGGACGGAACTCATTTGGACGTTGTGTTAAATCCATTGGGAGTACCGTC TCGGATGAATATCGGACAGGTCTTGGAAGTACATTTGGGAATGGCAATGAGGTCATTAAATGGCGGAACT CATATTGCCACTCCGGTATTTGACGGGGCAACGGAAGAACAAATTAAAGATTATTTGGAGAATCAAGGAC ATCCGAGAAGCGGAAAGGTGACCTTGTATGACGGAAGAACCGGAGATAAGTTTGACAACAAAATTACCGT GGGAATCATGTATATGTTGAAATTACACCACTTGGTAGAAGATAAAATGCATGCCAGAGCTATTGGACCA TATTCTTTGGTAACACAACAACCTTTAGGAGGAAAAGCACAATTCGGAGGACAAAGATTGGGAGAAATGG AAGTATGGGCTTTGGAAGCATATGGAGCATCTAATATTCTTCAAGAAATGTTGACCGTAAAATCCGATGA TGTGACAGGAAGAACAAAAACGTATGAAGCCATTATCAAAGGGGAAGAAATGCCGGATTCTGATTTACCG GAATCTTTCAAAGTATTATTGAAAGAATTCCAAGCTCTAGCATTGGATGTGGAATTATGCGATGAAAACG ATAATGTCATCAATGTCGATGAAGAGCTGAATAAGGAAGAGACCACCTTGGAATATTCTCCGTCAGATAT ATTAGAGATGGAGGAATATGAGGATGAGGATGATTACGAAGACGAAGAAGAATAG

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