F. necrophorum 1_1_36S_FusoPortal_Gene_60

InterPro predicted function: PAS fold;RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR013767;IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_60.out

Amino Acids: 463

ORF FASTA file - Amino Acids

MGEDILNIFKKIVESSYDGIYVTDGEGNTLFLNQAYEDITGLSMKELQGKNMEELVKKGF YSESSSLLAIKKRSEASINQKLKSGKEIFVTSTPVFDKQGKIIYVVTNVRDMRELERLEQ QFSNVKKLAEKYKSELDFLKKKNGENESSKNREMLNILKLIETTAKFDSSILLEGETGTG KTHLAYIIHEKSLRKEKAFIEVNCGAIPKNLIESELFGYERGAFTGADKNGKMGLFELAN HSTLFLDEISELSMEMQVKLLKVLETSYVVRVGGNKKIPIDVRIITASNKCIRKLVEEGK FREDLFYRINVVRVHIPPIRDRKEDIIDIVLTFLKQLNKRYGLNKRISKEVFQYFLNYSW PGNIREIKNMIEQLVVISTTEEITEDLLPKEMLHASKEILEEENQVYCQKCMEKYLAMSL KEATNEFQRDVIEKLLIELKSQRKVAERLEVNPSTITRKLQEK

Coding DNA - Genome Coordinates: 64340-62949 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGGAGAAGATATTTTAAATATTTTTAAAAAAATTGTAGAATCCTCTTATGATGGCATTTATGTTACGG ATGGAGAAGGAAATACTCTTTTTTTGAATCAGGCATATGAGGATATCACAGGCTTATCCATGAAAGAATT GCAGGGGAAAAATATGGAAGAGCTCGTAAAAAAAGGGTTTTACAGTGAGTCCAGTTCCTTGCTTGCTATC AAAAAAAGGAGTGAAGCAAGTATTAATCAAAAATTGAAAAGTGGAAAAGAAATTTTTGTAACAAGCACTC CGGTGTTTGATAAGCAGGGAAAAATAATTTATGTAGTAACCAATGTACGGGATATGCGAGAATTGGAAAG ACTGGAACAACAATTTTCGAATGTGAAAAAATTGGCAGAAAAATATAAATCGGAATTGGACTTTTTGAAA AAAAAGAATGGAGAAAACGAATCTTCAAAAAATAGAGAAATGTTAAATATCTTAAAGCTTATTGAAACTA CAGCAAAATTTGACAGTTCTATTTTATTAGAAGGAGAAACGGGAACGGGAAAGACACATTTAGCTTATAT CATTCATGAAAAAAGTCTTCGAAAAGAGAAAGCTTTTATTGAGGTAAATTGTGGAGCGATTCCTAAAAAT TTAATAGAATCGGAGCTATTCGGTTATGAAAGGGGAGCTTTTACAGGGGCGGATAAAAATGGAAAAATGG GTTTATTTGAATTGGCAAACCATTCCACTTTATTTTTGGATGAAATTTCGGAATTGTCTATGGAAATGCA GGTAAAATTGTTGAAAGTTTTGGAAACTTCCTATGTCGTCAGAGTTGGAGGAAATAAGAAGATTCCTATT GATGTAAGAATTATCACGGCTTCCAATAAATGTATCAGAAAACTTGTGGAAGAAGGGAAATTTAGAGAAG ACCTATTTTACAGAATCAATGTCGTCAGAGTACACATCCCTCCTATTCGAGATAGAAAAGAAGATATTAT TGACATTGTTCTCACTTTTTTGAAGCAGTTAAATAAAAGATACGGTTTGAATAAGAGAATTTCAAAAGAA GTGTTTCAGTATTTTTTAAATTATTCTTGGCCGGGTAATATACGGGAAATAAAAAATATGATTGAACAGT TGGTTGTGATTTCTACAACGGAAGAAATAACAGAAGATTTATTACCAAAAGAAATGTTACATGCATCAAA AGAAATTTTGGAAGAAGAAAATCAGGTTTATTGTCAAAAATGTATGGAAAAATATTTGGCAATGAGTTTG AAAGAAGCGACAAATGAGTTCCAAAGAGATGTCATTGAAAAATTGTTGATTGAATTGAAATCTCAGAGAA AAGTGGCAGAACGGCTGGAGGTCAACCCGAGCACCATTACTCGAAAGTTACAAGAGAAATAA

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