F. necrophorum 1_1_36S_FusoPortal_Gene_61

InterPro predicted function: "RNA polymerase sigma factor 54
InterPro Accessions: IPR007634;IPR007046

Link to full Interpro analysis


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Return to complete Genome Map of F. necrophorum 1_1_36S

FASTA file of all annotated F. necrophorum 1_1_36S genes - Amino Acids | FASTA file of all annotated F. necrophorum 1_1_36S genes - DNA

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Hidden Markov Model (HMMScan) for domains: 1_1_36S_FusoPortal_Gene_61.out

Amino Acids: 384

ORF FASTA file - Amino Acids

MKQQLELEQKQIVTLSQEMKLSFSVLSMSYDEVLKFWLGKIEGSRQSTEDSFFESLSQEE DFFQYLENQLMYLEVSENIRQKLIFCIHSLNEAGFLELSDDELRLHLGISQKELEEVYQF LWELEPVGVGTHNFKEAICLQLKKKNEWEEIIWEVLQHLEYIAEGQEEKLAEKLGIGLVQ LNQIMKKIKACNPKPSRGFSVRKTIKIVPDFYWKYSEGNIALEENKDLQKSLYRAEIKET PGIQILRKCIEKRIETLRNILEYVTDYQKDYLLGSGALKTLHEREVAEQLELHVSTISRA IQNKYLKTERGILSVKSLFCYSGEREEIKIEIQNLIEGEDKQKPYSDLEIAKYLGQKFLW NISRRTVSKYRKELGYFSSFQRKK

Coding DNA - Genome Coordinates: 65555-64401 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAACAGCAACTTGAATTAGAACAAAAGCAAATAGTGACATTGTCACAAGAAATGAAATTATCATTTT CTGTCCTTTCCATGTCCTATGATGAAGTATTGAAATTTTGGCTTGGAAAAATAGAGGGAAGTCGCCAATC TACAGAAGATAGTTTTTTCGAAAGTTTATCTCAGGAGGAAGACTTTTTTCAATATTTGGAAAATCAACTG ATGTATTTGGAGGTTTCCGAAAACATTCGACAGAAACTGATTTTCTGTATTCATAGTTTAAATGAAGCCG GTTTTTTGGAACTGAGCGATGATGAACTCCGTCTTCATTTGGGCATTTCCCAAAAAGAATTGGAGGAAGT CTATCAATTTTTATGGGAATTAGAACCGGTAGGGGTAGGGACTCATAATTTTAAAGAAGCAATCTGTTTA CAATTGAAAAAGAAGAATGAATGGGAAGAAATTATTTGGGAAGTGTTACAACATTTGGAATATATTGCAG AGGGACAGGAAGAGAAATTGGCTGAAAAATTAGGAATTGGTCTTGTGCAATTGAATCAGATTATGAAAAA AATAAAAGCTTGTAATCCGAAGCCTTCTCGAGGATTTTCTGTAAGAAAAACAATAAAAATCGTACCGGAT TTTTATTGGAAATATTCGGAAGGAAATATTGCATTGGAGGAAAATAAAGACTTACAGAAATCATTGTACC GAGCGGAGATAAAAGAAACACCGGGAATTCAGATATTGAGAAAATGCATTGAGAAGAGAATCGAAACCTT ACGTAATATTTTGGAATATGTCACAGACTATCAAAAGGATTATCTCTTAGGTTCGGGAGCCTTGAAAACT CTTCATGAAAGAGAAGTGGCAGAACAATTGGAGCTTCATGTTTCCACAATTTCACGGGCGATTCAAAATA AATACCTAAAAACAGAAAGGGGAATTCTTTCAGTGAAATCTTTGTTTTGTTATTCCGGAGAAAGAGAAGA AATAAAAATAGAGATTCAAAATTTAATAGAGGGAGAAGATAAGCAAAAACCTTATAGTGATTTAGAAATA GCAAAGTATTTAGGGCAAAAATTCTTATGGAACATTTCCAGAAGAACTGTCAGTAAATATCGGAAAGAGT TGGGATACTTCTCTTCTTTTCAAAGAAAAAAATAA

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