F. varium 27725_FusoPortal_Gene_1001

InterPro predicted function: PAS fold-4;RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR013656;IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1001.out

Amino Acids: 465

ORF FASTA file - Amino Acids

MLESYIELIKMIDNSFDGVMVVDENLIIRYCKYFSASGLGSVDVKTAIGKTPFDIFANIT KETSTFYRAVKYGETFLNNTQVILYSNGKKEPIIDSTIPIIINGKIIGAVNTVRFVSNFK KNNFTNHSNIIAPCFNDLYTIDDIIGTSEEILSLKNKISKVSKTDSNVFIYGETGTGKEM VAQSIHSNSDRKNKIFISQNCAAIPDNLLESILFGTTKGSYTDAINRPGIFEMAHGGTIF LDEINSMNLNMQAKLLRIIEDKKITRIGGIETKEVDVRIIAAINEIPEISMTEKRIRPDL FYRLSSVQIKTPSLAERNEDIEELAQFFIEFYNKKMNKDIKNISKDVLKIFYGYTWPGNV RELKNVIETAFNFSISKTIELSDIPEYIKNYKKENNHFKCSISNNEYPYKDISLSIALEN FEKDYILKASKNTLSFSELADALKISKQLLNHKIKKYDLRKYINY

Coding DNA - Genome Coordinates: 1106334-1104937 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGCTTGAAAGCTATATTGAATTAATAAAAATGATAGATAATTCCTTTGATGGAGTAATGGTTGTAGATG AAAATTTAATAATAAGGTATTGTAAATACTTTTCTGCTTCTGGACTTGGAAGTGTTGATGTAAAAACAGC TATTGGAAAAACTCCATTTGATATTTTTGCTAATATTACAAAAGAAACTTCTACCTTCTATAGAGCAGTA AAATATGGAGAAACTTTTCTTAATAATACACAGGTAATTCTTTACAGCAATGGAAAAAAAGAACCAATAA TTGATAGCACTATTCCTATCATTATAAATGGTAAAATCATAGGAGCTGTAAACACAGTACGATTTGTCAG CAATTTTAAAAAAAATAACTTCACAAATCATTCAAATATAATAGCTCCATGTTTTAACGATCTTTACACA ATTGATGATATAATTGGAACTTCTGAAGAAATACTTTCTTTAAAAAATAAGATATCTAAAGTTTCAAAGA CAGATTCAAATGTATTTATCTATGGAGAAACTGGAACAGGAAAAGAGATGGTAGCCCAGTCTATTCATAG CAACAGCGATAGAAAAAATAAAATATTTATTTCACAAAATTGCGCTGCTATACCTGATAACCTTTTAGAA AGTATTCTTTTTGGAACTACAAAGGGAAGCTATACAGATGCAATCAATAGACCTGGAATTTTTGAAATGG CACATGGAGGTACAATTTTCCTTGATGAAATAAATTCTATGAATCTTAATATGCAGGCAAAGCTATTAAG AATAATAGAAGACAAAAAAATAACAAGAATAGGTGGAATAGAAACAAAGGAAGTTGATGTACGTATTATT GCTGCAATCAATGAAATTCCTGAAATTTCTATGACCGAAAAAAGAATTCGTCCAGATCTTTTTTACAGAT TATCCAGTGTGCAGATAAAAACACCTTCATTAGCTGAAAGAAATGAAGATATTGAAGAGCTCGCTCAATT TTTCATTGAATTTTATAACAAAAAAATGAATAAAGATATTAAAAATATTTCAAAAGATGTTTTAAAAATT TTCTATGGTTATACATGGCCTGGAAATGTGAGAGAACTAAAAAATGTTATTGAAACTGCTTTTAATTTTT CTATTTCCAAAACTATTGAGCTTTCTGATATTCCAGAATATATAAAAAATTACAAAAAGGAAAATAATCA TTTCAAATGCTCTATTTCTAATAATGAATATCCATATAAAGATATATCTCTCAGTATAGCACTTGAAAAC TTTGAAAAAGATTATATATTGAAAGCTTCAAAAAATACACTATCTTTTTCTGAACTAGCTGATGCTCTCA AAATATCAAAACAACTTCTAAACCATAAAATTAAGAAATATGATTTGAGAAAATATATTAATTATTAA

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