F. varium 27725_FusoPortal_Gene_1005

InterPro predicted function: "DNA mismatch repair protein MutS
InterPro Accessions: IPR000432;IPR002625

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1005.out

Amino Acids: 778

ORF FASTA file - Amino Acids

MNRHSYTVLEFDKLREEISNYSAIEENHYKILGLEPFKDFSSLNRELDILRDFTDFLKFD GGLETAGMKDICKMTKKSQLIGTYLDVEDLWDINHNLRLFRVFKNRLDDLNKYKDLRDKF NDVPILRGVEDIINKAIDNNKEIKDDASLDLRDIRIHKKTLAMNIKRKFDELFNEPQFAK VFQEKIITERDGRSVVPVKADFKGQIKGIEHDRSSSGQTVFIEPLSIVALNNKNRELEIK EKEEIRKILLRITDYIRNNKDDIDKVGEAIITLDILNARAMYGIEKKCVVPNINNREILT LIEARHPFIPISSVVPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIPA HEHSSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTKASLVLLDELGSGTDP TEGSAFAMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLLI GIPGESNALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDVMKKQVEFL KEAAQRDKEAFEEKLRILEKEKNDILKEAYEKADRMMKEMQSKAAALVEKIQKEDNKKED IKNVQKSLNMLRSALQSDKSKTVIEKPKVARKVDFKVGERVFVNSLNQFANVLKINLSKE TTQVQAGILKLEVSLDDVKVVEEKKQKVYNSFSHKKTAVRSEIDLRGKMVDEAVYELETY LDRAIMNSYNEVYVIHGKGTGALREGILNYLKKCPYVKEYRIGGHGEGGLGCTVVTLK

Coding DNA - Genome Coordinates: 1110246-1112582 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAATAGACATAGTTATACAGTTTTGGAATTTGACAAGCTGAGAGAAGAAATTTCAAATTATAGTGCTA TAGAAGAGAACCATTATAAAATATTGGGGCTTGAACCTTTCAAGGATTTCAGCTCTTTAAATAGAGAGCT TGATATATTGAGAGATTTTACAGATTTTTTGAAATTTGATGGTGGATTGGAAACTGCTGGAATGAAAGAT ATTTGTAAAATGACAAAGAAATCACAATTGATAGGAACATATCTTGATGTGGAAGACTTATGGGATATCA ACCATAATCTAAGACTTTTTAGAGTATTTAAAAATAGACTAGATGATTTGAATAAATATAAAGATTTAAG AGATAAGTTTAATGATGTACCTATTTTAAGAGGAGTAGAAGATATTATTAATAAAGCTATTGATAATAAT AAAGAGATTAAAGATGATGCTTCTCTTGATTTAAGAGATATCAGAATCCATAAAAAAACTCTTGCAATGA ATATCAAGAGAAAGTTTGATGAACTTTTTAATGAGCCTCAGTTTGCCAAAGTATTTCAGGAAAAAATAAT CACTGAAAGAGATGGAAGAAGTGTAGTTCCTGTAAAAGCAGACTTTAAAGGTCAGATAAAAGGTATTGAA CATGACAGGTCATCAAGTGGGCAGACAGTATTTATTGAGCCTTTGTCAATAGTTGCTCTAAATAATAAAA ATAGAGAACTGGAGATAAAAGAAAAAGAGGAAATAAGAAAAATACTTCTTAGAATAACTGATTATATAAG AAACAATAAAGATGATATAGATAAAGTGGGAGAAGCAATTATTACTCTGGATATACTTAATGCCAGAGCT ATGTATGGAATAGAAAAAAAATGTGTAGTACCTAATATAAATAACAGAGAAATTTTGACATTGATAGAGG CAAGACACCCATTTATACCTATTTCATCAGTTGTACCTCTTACATTTGAAATAGGAAAAGACTACAACAC TCTTCTTATCACTGGACCAAATACAGGGGGAAAGACAGTTGCATTGAAAACAGCTGGACTTTTGACATTG ATGGCTTTGAGTGGAATACCTATTCCAGCACATGAACATTCAAGCATTGGATTTTTTACAGGAGTCTATG CAGATATTGGTGATGAACAGAGTATAGAGCAATCATTATCTTCCTTTTCTGCTCATTTAAAAAATGTTCA GGAGATACTTGAAAATGTGACAAAAGCTTCACTTGTGCTTTTAGATGAATTAGGATCAGGGACAGACCCT ACTGAGGGATCAGCTTTTGCTATGGCTGTTATAGATTATTTAAAGGATAAAAAATGTAAATCGATAATAA CTACTCACTATAGTGAAGTAAAAGCTCATGGATATAATGAAGAGGGAATAGAAACAGCATCAATGGAATT TAATGTGGAAACTCTTTCTCCTACATATAGGCTTTTAATAGGAATACCTGGAGAAAGTAATGCACTTACT ATTGCCAGAAGACTTGGAGTATCAGAAGAGGTAATCAACAAAGCAAAGAGCTATATAAGTGATGATAATA AAAAAATAGAAAAAATGATAAGTAATATTAAGGACAAAGCTGATGAACTTGATGTTATGAAAAAACAGGT GGAATTTCTGAAAGAAGCTGCTCAAAGAGATAAAGAGGCTTTTGAAGAAAAGCTTAGAATTTTGGAAAAA GAAAAAAATGATATATTGAAAGAAGCATATGAAAAAGCAGACAGAATGATGAAGGAGATGCAGTCTAAAG CAGCAGCTCTAGTAGAGAAAATACAAAAAGAAGATAATAAGAAAGAAGATATTAAAAATGTTCAAAAAAG TCTGAATATGCTTAGATCAGCGTTACAGTCTGATAAGAGTAAAACTGTAATAGAAAAGCCAAAAGTTGCA AGAAAAGTAGATTTTAAAGTGGGAGAAAGAGTGTTTGTCAACAGTCTTAATCAGTTTGCTAATGTACTTA AAATAAATCTTTCTAAAGAAACAACACAGGTACAGGCAGGAATATTAAAACTGGAAGTATCTCTAGATGA TGTAAAAGTAGTAGAAGAAAAGAAGCAGAAAGTATATAATTCATTCTCTCATAAGAAAACAGCTGTAAGA AGCGAAATAGATTTAAGAGGAAAAATGGTAGATGAAGCAGTTTATGAGCTTGAAACTTATCTTGATAGAG CTATTATGAATTCATATAATGAGGTTTATGTAATACATGGAAAGGGTACTGGAGCACTTAGAGAGGGAAT ACTTAATTACCTGAAAAAATGTCCTTATGTAAAAGAATATAGAATAGGAGGACATGGAGAGGGAGGATTA GGATGTACAGTAGTGACTCTGAAATAA

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