F. varium 27725_FusoPortal_Gene_1105

InterPro predicted function: Autotransporter beta-domain
InterPro Accessions: IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1105.out

Amino Acids: 1339

ORF FASTA file - Amino Acids

MISNFSEVEKSLKRCLKEKVSITAATVVGFLIAGTVAFGAATDVTVTTINGPKVKVESSE VEDATDSISVDQYKTLTGGEGPLANLLIVNANKETGEATFASAVDEKGNSLLGKVTAEAT ENGALTLIKTDKTYKSIVSSLEIEASGSSEKTATAMEAAEEGHTVTNAGTITVKDYALGM VAGAGATAVNSADGKIIVNSATNAVGMSAVTEATKTTTLTNNGKITVTKGTGISVAGAGE AEVAAGEIEVADAEGNIGININGTADTSNTTITDGTITVAGTRTGINIEGTGNVTLKNTT ITLSGAGTGIKYDGKTTKATAEISTGNIDIKAAGTGIEATMSKADESTLTITTGIISTGN AGATGIKITGAEVADSETSIATVTTTLGATAGTGVSVTGKANSTINVTLQDTQTPTSKSP ISIAKGIDVTSNGDKGIINIDVNQSNLQVVNDGNLVNIGDVGGTTNVDINQNVELVGTGN LVNVGAITGTTNVDINKDVKLTGTGNIVKAGAIASGTLNINLNVKGNTGLNVKENKTALD LSSVGAANKASVKNTGTVTIAGKGILVAGHDTNTISLSNQGLINLKVVNSEEKDKENNSV ISTGKKVNVANYGTITLNIGLNEFLGVADVESLDELTIEEVETALKTLGVIADKSEGTFS SVGYIRFKNGELFTTAKALTGEQTVEGLSSALNQEDSDRAFAIAKDDNFTLNSAGENEKL ENVQFSLDGTMKIGAEGTPVVIDNSNVERQVYITGNGKLEVENGATLNYSGNISVDNINT ANAAIAVTNTGTLTLANGALNMVAPESKTALLSEPANRVGIELTGAGTTNLNNFTVNADI KGEPSGGALQGTLSAKGKSRITGNVTDIKDIKVTDNGMLTFGANSKIIVSDTAAGKTTEI DLTDGKMGVEIGESGNVLMNSVGKIAFTGTYGQTSKESNKGKVVLLTNALTENTTFNLGI HDGLTDGDIIANENIYYNITQGNGGIWNAIFNKDALLQTTGTKYLELGNIFANTQPIHDL LSADIDLRVAQLDDLYSNNIYSETVKMSLDTLKMNEDAVLSLNVRPKQGEYTAQGKFLFT NTDYDRDGVVRDYKVETKNTGLLGAMEYGLTDTSSVGFAFSGTKQDLDMKNGASADGDAF YFGLYRNDKFNNIDLTTGLGYMIDRVDAKNFTGKDKFDSTAFSGYVQGKYNYAIGENLTL SPKARLTVTRFQQDSINNGRMKQEEVKDTMADVELGVEIKKGIALETGRMNLLAGASFTT NVAGKDDDYYKVSFISRAGNEGDSTKVKGANLEKNSLKLNIGADVELTNGVFYNGGLSYE FDDEDRDSIGVTLGAGYKF

Coding DNA - Genome Coordinates: 1196696-1200715 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGATTAGCAATTTTAGTGAAGTAGAAAAATCTTTAAAGAGATGCCTGAAGGAAAAAGTATCAATAACAG CAGCAACAGTGGTAGGGTTCTTAATAGCAGGAACGGTAGCATTTGGGGCAGCAACAGATGTAACTGTTAC AACAATTAATGGACCAAAAGTAAAAGTTGAAAGTAGTGAGGTAGAGGATGCTACAGATTCTATCTCTGTA GATCAGTATAAAACATTGACAGGAGGAGAAGGTCCTCTTGCAAACTTATTAATAGTAAACGCTAATAAAG AAACTGGAGAAGCTACTTTTGCTTCTGCTGTTGATGAGAAAGGAAACTCTCTTTTGGGAAAAGTTACTGC AGAAGCAACAGAAAATGGAGCACTTACTCTTATAAAAACAGATAAAACTTATAAATCTATAGTAAGTAGC TTAGAAATTGAAGCTAGTGGAAGTTCTGAGAAGACAGCCACAGCAATGGAAGCTGCTGAAGAAGGACATA CAGTAACAAATGCAGGAACAATTACAGTTAAGGATTATGCACTTGGTATGGTAGCTGGTGCAGGAGCAAC AGCTGTGAATAGTGCAGATGGAAAAATTATAGTAAATTCAGCTACAAATGCTGTAGGTATGTCAGCTGTA ACAGAAGCTACTAAAACTACTACTTTAACAAATAATGGAAAAATCACAGTAACAAAAGGTACAGGTATAT CAGTTGCTGGAGCTGGAGAAGCAGAAGTAGCAGCTGGAGAAATAGAAGTAGCAGATGCTGAAGGTAATAT AGGAATCAATATTAATGGAACAGCTGATACATCAAACACTACAATAACTGATGGAACAATCACAGTAGCT GGAACAAGAACAGGAATTAATATCGAAGGAACAGGAAATGTAACACTTAAAAATACAACTATCACTTTAT CTGGAGCAGGAACAGGTATCAAATATGATGGTAAGACTACTAAAGCAACAGCTGAAATATCTACAGGAAA TATCGATATTAAAGCTGCTGGAACAGGAATAGAAGCAACTATGTCAAAAGCAGATGAAAGTACTCTTACT ATCACAACTGGAATTATTTCAACAGGAAATGCTGGTGCAACAGGTATTAAAATAACTGGAGCAGAAGTAG CAGACTCTGAAACAAGTATAGCCACTGTAACAACTACATTAGGAGCTACAGCAGGAACTGGAGTAAGTGT AACTGGAAAGGCAAATAGTACTATTAATGTAACTCTTCAAGATACACAAACTCCAACATCTAAGTCTCCA ATATCAATAGCAAAAGGAATAGATGTGACTAGTAATGGAGATAAAGGAATAATCAACATTGATGTTAATC AAAGCAATCTTCAAGTAGTAAATGATGGAAACCTAGTAAATATTGGAGATGTAGGAGGAACTACAAATGT AGATATCAACCAAAATGTTGAACTTGTAGGAACAGGAAACCTAGTAAATGTAGGAGCTATAACAGGAACA ACAAATGTAGATATCAACAAAGATGTTAAACTTACAGGAACTGGAAACATAGTTAAAGCAGGAGCTATAG CTTCTGGAACTTTAAATATAAATCTTAATGTTAAAGGAAATACTGGTTTAAATGTAAAAGAAAATAAAAC AGCTCTTGATTTATCAAGTGTTGGTGCAGCTAATAAAGCTTCCGTTAAAAATACTGGAACTGTAACAATA GCAGGAAAAGGAATATTAGTAGCAGGACATGATACTAATACTATATCTCTTTCTAACCAAGGACTAATTA ATTTAAAAGTAGTTAATAGTGAGGAAAAAGATAAAGAGAATAACTCTGTAATTTCAACAGGAAAAAAAGT AAATGTAGCAAACTATGGAACTATTACATTAAATATAGGGTTAAATGAATTTTTAGGAGTAGCTGATGTA GAATCTTTAGATGAATTAACTATAGAGGAAGTTGAAACAGCTTTAAAAACTTTAGGAGTAATAGCTGATA AATCAGAAGGAACTTTCTCATCTGTTGGATATATTAGATTTAAAAATGGTGAATTATTCACTACAGCAAA AGCCCTTACAGGAGAACAAACAGTAGAAGGTCTTTCTTCAGCTTTAAATCAGGAAGATTCAGACAGAGCA TTCGCTATAGCTAAAGATGATAACTTTACATTAAATTCAGCTGGAGAAAATGAAAAATTAGAAAATGTAC AGTTCAGTTTAGATGGAACTATGAAAATAGGTGCTGAAGGTACTCCTGTAGTAATTGATAACTCTAATGT TGAGCGTCAAGTATATATTACAGGAAATGGAAAACTAGAAGTAGAAAATGGTGCAACATTAAACTATTCA GGAAATATATCAGTTGATAATATTAATACTGCTAACGCTGCAATTGCAGTAACAAATACTGGAACTCTTA CTCTTGCAAATGGAGCACTTAATATGGTAGCACCAGAATCAAAAACAGCACTACTTTCAGAACCAGCAAA TAGAGTAGGAATAGAATTAACTGGAGCTGGAACTACTAACTTAAATAATTTCACTGTAAATGCTGATATC AAAGGAGAACCTAGTGGAGGAGCTTTACAAGGAACACTAAGTGCTAAAGGAAAATCTAGAATAACTGGTA ATGTTACTGATATAAAAGATATTAAAGTAACTGATAATGGAATGCTTACATTTGGAGCAAATTCTAAAAT AATAGTTTCTGATACTGCAGCTGGAAAAACTACTGAAATAGACCTTACTGATGGAAAAATGGGAGTAGAA ATAGGAGAAAGTGGAAATGTACTTATGAACTCTGTAGGAAAGATAGCATTTACTGGAACATATGGACAAA CTTCTAAGGAATCAAATAAAGGAAAAGTAGTTCTATTAACTAATGCTCTTACTGAAAATACTACATTTAA TCTAGGAATTCATGATGGATTAACTGATGGGGATATAATAGCTAATGAAAATATTTATTACAATATAACA CAAGGTAATGGTGGAATATGGAATGCAATATTTAATAAAGATGCTCTATTACAGACAACTGGAACTAAAT ATTTAGAATTAGGTAATATATTTGCTAACACTCAACCTATCCATGATCTATTATCAGCAGATATTGATTT AAGAGTAGCTCAATTAGATGACCTTTACTCTAACAATATCTATTCTGAAACTGTAAAAATGTCTTTAGAT ACATTAAAAATGAATGAAGATGCAGTTCTATCATTAAATGTAAGACCAAAACAAGGTGAATATACTGCTC AAGGTAAATTCCTATTCACTAATACAGACTATGATAGAGATGGAGTAGTAAGAGATTACAAAGTTGAAAC TAAAAACACAGGATTGTTAGGAGCTATGGAATATGGATTGACTGATACTTCATCAGTGGGATTCGCGTTC TCTGGAACTAAACAAGACCTAGATATGAAAAATGGAGCAAGCGCTGATGGAGATGCATTCTACTTCGGAC TATATAGAAATGATAAGTTTAATAATATAGACTTAACTACAGGATTAGGATATATGATAGACAGAGTAGA TGCTAAAAACTTCACAGGAAAAGATAAATTTGATTCTACAGCATTTAGTGGATATGTTCAAGGTAAATAC AACTATGCAATTGGAGAAAATCTAACATTATCACCAAAAGCTAGATTGACTGTAACAAGATTCCAACAAG ATTCTATTAATAATGGAAGAATGAAGCAGGAAGAAGTAAAAGATACTATGGCAGATGTAGAATTAGGAGT AGAAATCAAAAAAGGAATAGCTCTTGAAACAGGAAGAATGAATCTATTAGCAGGAGCAAGTTTCACTACT AATGTAGCAGGAAAAGATGATGACTACTATAAAGTAAGCTTCATAAGCAGAGCAGGAAATGAAGGAGATT CTACAAAAGTTAAGGGAGCTAATTTAGAGAAAAATAGCTTGAAACTTAACATAGGAGCAGATGTAGAATT AACAAATGGTGTATTCTACAATGGAGGATTGTCTTATGAATTTGATGATGAAGACAGAGATTCTATAGGA GTTACATTAGGGGCAGGATACAAATTCTAA

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