F. varium 27725_FusoPortal_Gene_1360

InterPro predicted function: Autotransporter beta-domain
InterPro Accessions: IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1360.out

Amino Acids: 1123

ORF FASTA file - Amino Acids

MIEKIMKAVKSSNKKRSRNITIGTVIGFLLSCTAVMGAGDYLWIKEDSGKIKFSTDSTTD SAEGTWNERNPYENAGNIWDKDTKTYTNNTLLSSNAANGKNSSGRNISYGLRLSGELTDV NFINNSSIGEMSGVAYNYGYGIYNESTKMGNIENMGVISGYGTSSSGYGNGIENYKGTIG DITNTGVISGYCSSSYGYGNGYGIENDEGTIGDITNTGVISGYGNGLSSGSGYGITNYSL ESLAQMGNITNAGLINGSGSSTGSGRGINNTHTMENITNTGIISGTGKLDSSGKSYGIYG IYSVDKIGNIINTGIISGTSKHDGNYESCGIYNFGKMGNIENTGVIYGTDNAIKNEGSKT IDTVNNYGILVNGKDQDVNAGTITNMNNYGLTIKNEGKGTITAGTAGTQDITIEYDKDGK VIKSRGMTIKNANIEGGSGTGTSTESIELGNNNYDNYILNGKDETLKVTASNAEVTGSII NAYGTTVVFGDTGDKELTLSGTIVNGGIEDSTNGIAISGSNNGDTLILQSGEIEYKINEE KKSATQNTVVNGNINMGAGADILTVGDGTIINGTLDGGDGDDTLNFGMSSVAKSNPAERE GVRILYNISSFEKMNINTNVTLFEKTINASGEVAELEVTGAEKITIEENGTLTLRINSSE MGSGDEADKIVGHALYENEGEISSTDGGKLLLALNGAGNESIISFGKTTLGDGLVTGNEG TLDTTSQLHTILKLSENEVKVVIRWDIPEILKYKELNKIYHGILSVDDLIANFNVDSDEK LSTFLGYLNDIYAGNPYSYSSELSRKSVGMFRDIATENQFQPELNKWLIMGGLTHVDGGT KDTYYGKGYYTYDIGSSDMDADTKITGAYILGEYGVSDTLTYGVVIGGNKLKSDLSNGSK VDGDALYMGAYAKKYVGNLKVTGGLGLQYGDYDADRIAAGRGITETRSYSDNYNDMTYDI YLNGRYSHNIGENLFLEPYGTLSYTYVDQEGADEGSKVLAIETDSKTFDYTAAKVGLDIK KVIPHEKGKSTLSAGVSYTRLLTGADEENITGRFKGGSDFDILVAHKNKHSIGLNAKYAL ELESGILFDVKGSYSVERDSHNESGKNRAKGEWIVGAGLGYRF

Coding DNA - Genome Coordinates: 1493507-1496878 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGATTGAAAAGATTATGAAGGCAGTAAAAAGCAGCAACAAAAAGAGAAGTAGAAATATAACAATAGGGA CAGTTATTGGATTTTTGTTGTCATGCACAGCAGTAATGGGAGCAGGTGATTATCTTTGGATAAAAGAAGA TAGTGGAAAAATTAAATTTAGTACTGATAGTACTACTGATAGTGCTGAGGGAACTTGGAATGAAAGAAAT CCATATGAAAATGCTGGAAATATTTGGGATAAGGATACCAAAACTTATACAAACAATACGCTATTGTCAT CAAATGCAGCTAATGGGAAAAATAGTAGCGGTAGAAATATAAGTTATGGACTTAGATTAAGTGGTGAATT GACTGATGTAAATTTTATAAATAATAGCTCAATAGGAGAAATGAGTGGTGTAGCTTATAATTATGGTTAT GGAATATACAATGAATCAACTAAAATGGGAAATATAGAAAATATGGGAGTAATAAGTGGTTATGGTACTA GTTCTAGTGGTTATGGTAATGGAATAGAGAATTATAAAGGCACAATTGGAGATATAACAAATACAGGAGT AATAAGTGGTTATTGTTCTAGTAGTTATGGTTATGGTAATGGTTATGGAATAGAGAATGATGAAGGCACA ATTGGAGATATAACAAATACGGGAGTAATAAGTGGTTATGGTAATGGCCTTAGTTCTGGTTCTGGTTATG GAATAACTAATTATTCACTTGAATCTCTAGCTCAAATGGGAAATATAACAAATGCAGGACTGATAAATGG TTCTGGTTCTAGTACTGGTAGTGGTAGGGGAATAAATAATACACATACAATGGAAAATATAACAAATACA GGAATAATAAGTGGTACTGGTAAACTTGATAGCTCTGGTAAAAGTTATGGAATATATGGAATATATAGTG TAGATAAAATTGGAAATATAATAAATACAGGAATAATAAGTGGTACTAGTAAACATGATGGCAATTATGA AAGTTGTGGAATATATAATTTTGGTAAAATGGGAAATATAGAAAATACAGGAGTTATTTATGGAACCGAT AATGCTATAAAGAATGAGGGCTCTAAAACTATAGATACAGTAAATAATTATGGAATACTTGTAAATGGAA AAGATCAAGATGTAAATGCTGGAACTATAACTAATATGAATAACTATGGACTTACAATAAAAAATGAAGG TAAGGGTACAATAACTGCAGGAACTGCAGGAACTCAAGATATAACAATAGAGTATGATAAAGATGGGAAA GTAATAAAATCAAGAGGTATGACTATAAAAAATGCTAATATAGAAGGTGGTTCAGGGACAGGAACATCAA CAGAAAGCATTGAATTAGGAAATAATAATTATGATAATTATATTTTAAATGGAAAAGACGAAACTTTAAA AGTAACAGCTTCAAATGCTGAAGTAACAGGTTCAATAATCAATGCTTATGGAACAACAGTTGTATTTGGA GATACAGGAGATAAAGAGCTGACTTTATCAGGAACAATAGTAAATGGAGGGATAGAAGATAGTACTAATG GTATAGCCATATCAGGAAGTAACAATGGAGATACTCTAATACTACAGTCAGGAGAAATTGAATATAAAAT TAATGAAGAGAAAAAATCTGCAACTCAAAATACTGTAGTCAATGGAAATATAAATATGGGAGCTGGAGCT GATATTCTCACAGTAGGAGATGGAACAATAATCAATGGAACTCTTGATGGTGGAGATGGAGATGATACTC TTAATTTTGGAATGAGTTCAGTTGCTAAGTCAAATCCAGCAGAGAGGGAAGGAGTAAGAATCCTATATAA TATATCTAGTTTTGAAAAGATGAATATAAATACAAATGTTACTTTATTTGAGAAAACTATTAATGCTAGT GGAGAAGTAGCAGAATTAGAAGTAACAGGTGCAGAGAAGATAACAATAGAGGAAAATGGAACTCTTACAT TGAGAATAAATAGCAGTGAAATGGGAAGTGGAGATGAAGCAGATAAAATTGTAGGTCATGCACTTTATGA AAATGAAGGAGAAATATCTTCAACTGATGGAGGAAAACTTCTACTTGCTCTCAATGGAGCAGGAAATGAG AGTATAATATCTTTTGGAAAGACTACTTTAGGAGATGGATTAGTAACAGGGAATGAAGGAACTCTTGATA CTACTTCCCAGTTGCATACTATATTGAAACTATCTGAAAATGAAGTAAAAGTTGTTATAAGATGGGATAT TCCTGAAATACTTAAATACAAAGAGCTTAATAAGATATATCATGGAATTTTAAGTGTCGATGATTTAATA GCTAATTTTAATGTAGATAGTGATGAGAAACTTTCAACATTCTTAGGATACTTAAATGACATCTATGCAG GAAATCCATATTCATATTCAAGTGAACTTTCAAGAAAGTCAGTGGGAATGTTTAGAGATATAGCCACAGA AAATCAATTCCAACCAGAACTGAATAAATGGTTGATAATGGGTGGACTGACTCATGTAGATGGAGGAACT AAGGATACATACTATGGAAAAGGATACTACACTTATGATATAGGAAGTTCTGATATGGACGCAGATACTA AGATAACTGGAGCATATATACTTGGAGAATATGGAGTATCAGATACATTGACTTATGGAGTAGTAATTGG AGGAAACAAACTTAAATCTGATTTGTCTAATGGGTCAAAAGTAGATGGAGATGCGCTATATATGGGAGCA TATGCTAAAAAGTATGTAGGAAATCTAAAAGTAACAGGAGGATTAGGGCTGCAGTATGGAGATTATGATG CAGACAGAATTGCAGCAGGAAGAGGAATAACAGAAACAAGAAGTTACTCAGATAACTATAATGATATGAC ATATGATATTTACCTAAATGGAAGATATTCTCATAATATAGGAGAAAATCTATTCTTAGAACCATATGGA ACATTGTCGTATACATATGTAGACCAAGAGGGCGCAGATGAAGGAAGCAAGGTATTAGCAATAGAAACAG ATTCAAAAACATTTGACTATACAGCAGCAAAAGTGGGATTAGACATTAAGAAAGTAATACCACATGAGAA AGGGAAAAGCACCCTGTCAGCAGGGGTAAGCTATACAAGACTGCTTACTGGGGCAGATGAAGAGAATATC ACAGGAAGATTTAAAGGTGGAAGCGACTTTGATATTTTGGTAGCTCATAAAAATAAACACAGTATAGGAT TAAATGCTAAGTACGCGCTTGAACTTGAAAGTGGAATTCTGTTTGATGTAAAAGGAAGTTATTCAGTAGA AAGAGATTCACACAATGAAAGTGGAAAGAACAGAGCAAAAGGTGAATGGATAGTAGGAGCAGGACTGGGG TATAGGTTTTAA

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