F. varium 27725_FusoPortal_Gene_1374

InterPro predicted function: Crp-type HTH domain;Cyclic nucleotide-binding domain
InterPro Accessions: IPR012318;IPR000595

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1374.out

Amino Acids: 223

ORF FASTA file - Amino Acids

MDLNIIKRLKKTGLFSEIEEKSIEEYFTGIKYEIKKYSQDENIAFRGDEIKGLYINLEGK VATEMLKESGEVKRIEEIDNYSLLATAFIFGDKNRFPVDLNAVTSTSIFYIEKNELIQLL KKDDRLLKKFLDEISCKAQFLSNHLWNNFTNKTIGEKFSQYILENQKDGFFQMKISVKDL AEYFDVSRPSLSRVIKNFLEENILEKIEKRRYKIIDMSRLKGQ

Coding DNA - Genome Coordinates: 1512286-1512957 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGATTTAAATATAATTAAAAGATTAAAAAAAACAGGATTGTTTTCTGAGATAGAAGAGAAGAGTATAG AAGAATATTTTACTGGAATAAAATATGAGATTAAAAAATATTCTCAAGATGAAAATATAGCTTTCAGAGG AGATGAAATAAAAGGGTTGTATATCAATTTGGAAGGTAAAGTAGCTACAGAAATGTTGAAAGAAAGCGGA GAGGTAAAAAGAATAGAAGAAATAGACAATTATTCTCTTTTAGCTACAGCATTTATCTTTGGAGATAAGA ATAGGTTTCCTGTAGACTTGAATGCTGTAACTTCTACTTCCATATTTTATATAGAAAAAAATGAACTTAT ACAATTATTGAAAAAAGATGATAGATTATTAAAAAAATTTTTGGACGAAATAAGTTGCAAAGCACAATTT TTATCTAATCACCTTTGGAATAATTTTACTAATAAAACTATTGGAGAAAAATTCAGTCAGTATATTTTAG AGAATCAAAAAGATGGTTTTTTTCAAATGAAAATATCTGTAAAAGATTTAGCAGAATATTTTGATGTGAG TCGTCCATCTCTTTCAAGAGTAATAAAAAATTTTTTAGAAGAAAATATTTTAGAAAAAATTGAGAAGAGA AGATATAAAATAATTGATATGAGCAGGTTGAAAGGCCAATAA

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