F. varium 27725_FusoPortal_Gene_1514

InterPro predicted function: Autotransporter beta-domain
InterPro Accessions: IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1514.out

Amino Acids: 1188

ORF FASTA file - Amino Acids

MIEKIMKAVKRGNKRRGRNITIGAVVGFLLSCTAVMGEDNYLWIKGDSGAIEFNTTATTD DDGKWEKENPYSDNKWDKDTKTYTNNMILLSNGEGGNYGRNLSYGLRLSGELTDVNFVNN GSIIGIMRDTSSSSSGYGIYNSAKMSNIENTGVISGSGIYNGNAASYGYGIYNNSSAEIK DITNTGTISGFADDVNDSGSTASGHGIYNDSGAEIQNITNTGTISGFADDVNDSGSTASG HGIYNDSGAEIQNIKNTGLISGYGTGRRGSNGYGIYNNPRAEIKDITNIGAIINIGVISG YGDDTTSSIGSGNGYGIYNNGIYNNELAKIGNITNTGVISGYGSGTGSASSSGIYSVNND FSTTSDGEIENITNTGIISGSGVGIYNAKSGSKYKMEIGDITNTGVIYGKDNAIKNNSGT IGTVDNYGILATQGDSVIKGTIGTEKNYGLYIGKDGKITVGTEKLSDDSIKVVVGYTEDG KEIVKDMTIKNATLNGDSGSATSTVSFVLEGESGEYDNSILNGKDETLKVSGTGNQITDS IINAYETAVVMDSKDSALILNNTIANGGAAEDGEVATIEIKGENNTLTLKGESIVNTGGK DNVAITVEGENNVLVLEGNAKVNGEMKATGENNTLNLYGKVNSNLNKSNNISEAASMNIL HNITGFTNMNIDNNVTFFEDVKVTGTEKVTIAETGTLNLRLKNTEETVEVGEEFIPKATH AFSGNKNEMVIQGEGTAGTLRFITNGIGKKIYVDMENIELRNLYFKTSSIIDGYEVNDKV SVILGAYGNLNEIYRPENMGKSHRYEALNNIYKGIYSSTDDNLNALRVLISSNGKLGNNY DENMSDEEQLKNLLSYLGSIYTETPYSFSSELSRKSAGMFRDIITENQFKPNLNQWLIMG GLTHTDGGTKDSYYGQNYHGFDTGTADVDVDMKLTGAYALGKYGYSENVSLGVTVGGNRS EAKLPMSKVKGNSGYIGAFAENYRGNLTLKAGAGIQYSEYDANRATLGGHSYSEKYSDMT YDIYLNGRYSHNIGENLFLEPYGTLSYTYIKQDSADEGSKVLAIETDSKTFDYTAAKVGV DLKKVIPHEKGKSTLSAGVSYTRLLTGADEENITGRFKGENATDFDILVAHKNEQSIGLN AKYALELESGILFDVKGSYNVERDSHNGTGKNRAKGEWIVGAGIGYKF

Coding DNA - Genome Coordinates: 1660491-1664057 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGATTGAAAAGATTATGAAGGCAGTAAAAAGGGGAAATAAAAGAAGAGGAAGAAATATAACAATAGGGG CAGTAGTAGGATTTCTATTGTCATGTACAGCAGTAATGGGAGAGGATAATTATCTTTGGATAAAAGGAGA TAGTGGAGCAATAGAATTTAATACAACTGCAACTACTGATGATGATGGAAAGTGGGAGAAAGAAAATCCA TATAGCGATAATAAATGGGATAAGGATACTAAAACTTATACAAACAATATGATATTGTTATCTAATGGGG AAGGTGGGAACTATGGTAGGAATTTAAGTTATGGACTTAGATTAAGTGGTGAATTGACTGATGTGAATTT TGTAAATAATGGTTCAATAATAGGAATAATGAGGGATACTTCTAGTTCTAGTTCTGGTTATGGAATATAT AATTCAGCTAAAATGAGCAATATAGAAAATACAGGAGTAATAAGTGGCTCAGGTATTTATAATGGTAATG CTGCTAGTTATGGTTATGGAATATATAACAATTCAAGTGCTGAAATAAAAGACATAACAAATACAGGAAC AATAAGTGGTTTTGCTGATGATGTTAATGATAGTGGCAGTACTGCTTCTGGTCATGGAATATATAACGAT TCAGGTGCAGAAATACAAAACATAACAAATACAGGAACAATAAGTGGTTTTGCTGATGATGTTAATGATA GTGGCAGTACTGCTTCTGGTCATGGAATATATAACGATTCAGGTGCAGAAATACAAAACATAAAAAATAC AGGACTGATAAGTGGTTATGGTACTGGTAGGCGTGGTAGTAATGGTTATGGAATATATAACAATCCAAGA GCCGAAATAAAAGACATAACAAATATTGGAGCTATAATAAATATAGGAGTAATAAGTGGTTATGGTGATG ATACTACTAGCAGTATTGGTTCGGGTAATGGTTATGGAATATATAATAATGGAATATATAATAATGAGTT AGCTAAAATAGGAAATATAACAAATACAGGAGTAATAAGTGGTTATGGTTCTGGTACAGGTTCTGCTTCT AGTTCTGGAATATATAGTGTTAATAATGATTTTTCTACTACTAGTGATGGGGAAATAGAAAATATAACAA ATACAGGAATAATAAGTGGTTCTGGTGTTGGAATATATAATGCTAAGTCGGGTTCTAAGTATAAAATGGA AATAGGAGATATAACAAATACAGGAGTTATTTATGGAAAAGATAATGCTATAAAGAATAATAGTGGAACT ATAGGTACAGTAGACAACTATGGAATACTTGCAACACAAGGGGACTCAGTAATTAAGGGTACTATAGGTA CTGAAAAGAATTATGGTTTATACATTGGAAAAGATGGAAAAATAACTGTAGGTACCGAGAAATTAAGTGA TGATTCTATAAAAGTAGTAGTAGGATACACTGAAGATGGAAAAGAAATAGTTAAAGATATGACAATAAAA AATGCTACATTAAATGGAGATTCAGGAAGTGCAACTTCAACAGTAAGTTTTGTACTTGAAGGAGAATCAG GAGAATATGATAATTCAATATTAAATGGAAAAGATGAAACTTTAAAGGTTTCAGGAACAGGAAATCAAAT AACAGACTCTATAATCAATGCCTATGAAACAGCAGTAGTTATGGATAGTAAAGATTCAGCCCTTATTCTC AACAACACAATAGCAAATGGAGGAGCAGCAGAAGATGGAGAGGTAGCAACAATAGAGATTAAAGGAGAAA ATAATACTCTCACTCTAAAGGGAGAATCAATAGTAAATACAGGGGGAAAAGATAATGTAGCCATAACAGT TGAAGGGGAAAATAATGTTCTTGTTTTAGAAGGAAATGCAAAAGTTAATGGAGAGATGAAAGCAACAGGA GAGAACAATACTCTCAATCTATATGGAAAAGTTAACAGCAATTTGAATAAATCAAATAACATATCTGAAG CTGCAAGCATGAATATACTTCATAATATAACAGGATTTACAAATATGAATATAGATAACAATGTGACATT CTTTGAAGATGTAAAAGTAACTGGTACAGAAAAAGTAACAATAGCTGAAACAGGAACTTTAAACCTTAGA CTTAAGAACACAGAAGAAACTGTAGAGGTAGGTGAAGAATTTATACCAAAAGCTACTCATGCTTTTTCAG GCAATAAAAATGAAATGGTTATACAGGGAGAAGGAACAGCAGGAACTTTGAGATTCATAACAAATGGAAT TGGGAAAAAAATCTATGTTGATATGGAAAATATTGAATTAAGAAATCTATATTTTAAAACTAGCTCTATA ATAGATGGATATGAAGTTAATGATAAAGTAAGTGTTATATTAGGAGCATATGGAAATTTAAATGAAATAT ATAGACCAGAAAATATGGGAAAAAGTCATAGATATGAAGCATTAAACAATATCTACAAAGGGATATACAG TAGTACAGATGATAACTTAAATGCTTTAAGAGTACTCATTTCTTCTAATGGAAAATTAGGAAATAATTAT GATGAAAACATGAGTGATGAAGAGCAACTTAAAAATCTTTTGAGCTATTTAGGAAGTATCTACACAGAAA CTCCATACTCATTTTCAAGCGAACTTTCAAGAAAATCAGCTGGAATGTTTAGAGATATAATCACAGAGAA CCAGTTCAAACCAAATTTAAATCAGTGGTTGATAATGGGTGGATTGACTCATACTGATGGAGGAACTAAA GACAGCTATTATGGACAGAATTATCATGGTTTTGATACAGGTACAGCAGATGTAGATGTGGATATGAAGC TTACTGGAGCTTATGCCCTGGGTAAATATGGATATTCAGAAAATGTATCATTGGGAGTAACAGTAGGTGG AAACAGAAGCGAAGCTAAACTTCCAATGTCAAAGGTAAAAGGAAACAGTGGATATATAGGTGCTTTTGCA GAAAACTACAGAGGAAACCTTACACTGAAAGCTGGAGCAGGAATTCAATATTCAGAATATGATGCTAATA GAGCAACATTGGGAGGACACAGCTACAGTGAGAAATATTCAGATATGACATATGATATTTATCTAAATGG AAGATATTCTCATAACATAGGAGAAAACCTGTTCTTAGAACCATACGGAACACTGTCATATACATATATC AAGCAAGATAGCGCAGATGAAGGAAGCAAGGTATTAGCAATAGAAACAGATTCAAAAACATTTGACTATA CAGCAGCAAAAGTGGGAGTAGACCTTAAAAAAGTAATCCCTCATGAAAAGGGAAAAAGTACGCTATCAGC AGGGGTAAGCTATACAAGACTTCTTACTGGGGCAGATGAAGAGAACATCACAGGAAGATTTAAAGGAGAA AATGCAACTGACTTTGATATCCTAGTAGCTCATAAAAATGAACAAAGCATAGGACTTAATGCTAAGTATG CACTTGAACTTGAAAGTGGAATCCTGTTTGATGTAAAAGGAAGCTACAATGTGGAAAGAGATTCACACAA TGGAACAGGTAAAAATAGAGCAAAAGGTGAATGGATAGTAGGAGCAGGAATAGGATACAAGTTCTAA

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