F. varium 27725_FusoPortal_Gene_1544

InterPro predicted function: LysM domain;Peptidase M23
InterPro Accessions: IPR018392;IPR016047

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1544.out

Amino Acids: 350

ORF FASTA file - Amino Acids

MKSKIKVFIILAVVFYFGIEFANPFKEEVVDLKKFTDYYDTTEETNGGVTLLNDSFYTFE KEYNFANEYKPIGFDKKDTGNTGTDKDGIRETAINQIMSTEKKLPVKSEYIVKQGDTISQ IAEANGMTMNMLLANNPNVSVKNLKIGQKLTIVSENGIFYKVQKGDSLSKIASKFKMKLD DITAYNDIDAKNLKVGQDIFLKNPDIRVLANSGKGGITVASAGFRFPVEYKGVNSPYGSR FHPVLKRYIFHAGVDLKARYVPLRAAQSGKVSYAGYMNGYGKIIIIKHSNGYETRYAHLD KIGVKVGQNVNKGELIGKTGMSGRVTGPHLHFEVRKNGKTENPMSHLTRK

Coding DNA - Genome Coordinates: 1697891-1698943 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAAATCTAAAATAAAAGTTTTTATAATATTAGCAGTTGTTTTTTATTTCGGAATAGAGTTTGCCAATC CTTTTAAAGAAGAAGTGGTGGATTTAAAAAAATTTACAGATTATTATGATACAACTGAAGAAACAAATGG TGGAGTTACTCTATTAAATGATAGTTTTTATACTTTTGAGAAGGAGTATAATTTTGCCAATGAATATAAG CCAATAGGATTTGATAAAAAAGATACTGGAAATACAGGGACAGACAAGGACGGAATTAGAGAAACTGCTA TAAATCAGATTATGTCTACTGAGAAAAAATTACCTGTAAAAAGTGAATATATAGTTAAACAGGGAGATAC AATTTCTCAAATAGCTGAAGCAAATGGAATGACAATGAATATGCTTCTTGCAAATAATCCTAATGTTTCA GTGAAAAATTTAAAGATAGGGCAAAAATTAACTATCGTTTCTGAGAATGGAATATTCTATAAAGTTCAAA AAGGAGATTCCCTATCTAAAATAGCTTCAAAGTTTAAAATGAAACTTGATGATATAACAGCATATAATGA TATAGACGCAAAAAATCTTAAAGTTGGACAGGATATATTTTTGAAAAATCCAGATATAAGGGTTTTAGCT AATTCTGGAAAAGGTGGAATAACAGTAGCAAGTGCAGGATTTAGATTTCCTGTTGAATATAAAGGAGTAA ACAGCCCATATGGAAGTAGGTTTCATCCAGTTTTAAAGAGATATATATTTCATGCTGGAGTAGATTTAAA AGCAAGATATGTACCTTTACGTGCAGCTCAGAGTGGAAAAGTAAGCTATGCTGGATATATGAATGGATAT GGAAAAATAATAATAATAAAACATTCTAATGGTTATGAAACTAGATATGCTCATTTGGATAAAATTGGTG TAAAAGTTGGGCAGAATGTTAATAAAGGTGAATTAATAGGAAAAACAGGAATGTCTGGAAGAGTGACAGG ACCTCATCTTCATTTTGAAGTTAGAAAAAATGGAAAAACAGAAAATCCTATGAGTCACTTAACAAGAAAA TAA

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