F. varium 27725_FusoPortal_Gene_1677

InterPro predicted function: "Lipopolysaccharide assembly
InterPro Accessions: IPR010664;IPR005653

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1677.out

Amino Acids: 895

ORF FASTA file - Amino Acids

MNKKKIYIIIFVVIIILGYLNYFKDENDLSDIKKAIETTNVTYDSEDYHVEADKQVDYVD DNETNFEKAKALVKDMVISGDNVFIDKVRNLALKNNILGVSPNGWKFNTEAARYDKLKDE ITSDVGVSAENAEKKVKVSGKNFVTDSKMSYIELKDNVVLENEKIKLKGDIGRYSDASKI VTLSGNITIDGTDRENAEISGNFLNLKYSVDDKILEAWEPYDVTYSGAKLSAGNLWYQDT TEALLVTKNVIIETNGYKIYVDKIQREANSNIVKFFGKITGSNGIYSFSGKEAVYDINTG ELTFYGDVKITSTKGEELTADKIVYNNNTKFITAYGEKKDAVYISNNGELRSKEFRYNNE TKELFADKKYDFKSQKYDSIGDKFYFNDLTKDGYIVNGTMYDKIKKQTAKGKRMDFNTET KIYTVKENSVFENQDYRLESNDITYNGVTGKVETPDKYKVISLKNETSFTGVGAVYDENT GELVSNGEINASGRNFIASGENLTYNNKNGIGELQSKISFTNTKNGTTVTGDKLLFQKDN YMELIGNLVINSEKIVAKSSRGKYNLEEEKVYIPEKIDFESKDKLTSGTMSKGVFDVKAS VFTGDNFKGKNKENDIKSDKMKYYTNEDKVEFGKNTVIVTPESRLRGNRLDYNLKTEIVI SPEKYTIDYGDFTIVGSEGTFDNKQGLLKSTNADITSKAGDRFKSDKADGNLKEMRIDFI GNAKGHMIHQGKRTDFTGDFARVYFKNDGGYKAIRSEIKKNAVFIQEEKKLQSDYIEADI ERNLIFSRDNTKLTVTDAKNGDTIVTSDTAEIDINRDIATLVGNVYIENKNPEQGITIIT AEKGIIRQKTGILDLMGNVKIENKESIIEADEGTYNTNTKKIKAKGHVFINHKNN

Coding DNA - Genome Coordinates: 1853237-1855924 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAATAAAAAGAAAATCTATATAATTATTTTTGTAGTTATAATAATATTAGGTTACCTGAACTATTTTA AAGATGAAAATGATCTGTCTGATATAAAAAAAGCTATAGAAACAACAAATGTTACTTATGATAGTGAAGA CTATCATGTTGAAGCAGATAAACAAGTAGATTATGTAGATGATAATGAAACAAATTTTGAAAAGGCAAAA GCCTTAGTAAAGGATATGGTAATAAGTGGAGATAATGTATTTATAGATAAAGTGAGAAATTTAGCATTAA AAAATAATATACTTGGAGTGAGTCCAAATGGGTGGAAATTTAATACAGAAGCAGCTCGTTATGATAAACT AAAAGATGAAATAACCTCTGATGTTGGAGTATCTGCAGAGAATGCTGAGAAAAAAGTAAAGGTATCTGGA AAGAATTTTGTTACTGATAGCAAGATGAGTTATATAGAACTGAAAGATAATGTAGTTTTAGAAAATGAAA AAATAAAATTAAAAGGCGACATTGGTAGATATAGTGATGCCAGCAAAATAGTTACACTTTCAGGAAATAT AACTATTGATGGAACAGATAGAGAAAATGCTGAAATATCTGGAAATTTTCTTAATTTAAAATATTCAGTA GATGATAAAATTCTTGAGGCATGGGAACCTTATGATGTAACTTATAGTGGAGCAAAACTTTCAGCAGGGA ACTTATGGTATCAAGACACCACAGAAGCCCTTTTGGTTACTAAAAATGTGATAATAGAAACTAATGGATA TAAGATATATGTTGATAAAATTCAAAGAGAAGCCAACAGTAATATAGTTAAGTTTTTTGGGAAAATAACT GGAAGTAATGGGATATATTCTTTTTCTGGAAAAGAAGCAGTTTATGATATAAATACTGGAGAACTAACTT TTTACGGAGATGTAAAAATTACATCAACGAAAGGTGAGGAATTGACAGCAGATAAAATAGTATATAATAA TAATACTAAATTTATAACTGCATATGGAGAAAAGAAAGATGCAGTATACATTTCAAATAATGGAGAATTG AGAAGTAAGGAATTTAGATATAACAATGAAACTAAAGAGCTGTTTGCAGATAAAAAATATGATTTTAAAA GCCAAAAATATGACAGTATTGGAGATAAATTCTATTTCAATGATCTGACAAAAGATGGATATATAGTAAA TGGAACTATGTATGATAAAATCAAAAAACAAACTGCCAAAGGTAAAAGAATGGATTTTAATACTGAAACA AAAATATACACAGTAAAGGAAAATTCAGTATTTGAAAACCAAGATTATAGATTAGAAAGTAATGATATAA CATATAATGGAGTTACTGGAAAAGTAGAAACACCAGATAAATATAAAGTTATATCTTTAAAAAATGAAAC ATCTTTTACAGGAGTAGGAGCAGTATATGATGAAAATACAGGGGAATTGGTAAGTAATGGAGAAATAAAT GCTTCTGGAAGAAATTTTATTGCCAGTGGAGAAAATCTTACATATAATAATAAAAATGGAATAGGAGAAC TTCAAAGTAAAATTTCTTTTACAAATACTAAAAATGGAACAACAGTGACAGGAGATAAACTTCTATTTCA AAAAGATAATTATATGGAGCTTATAGGAAACCTTGTAATAAATAGTGAAAAAATAGTAGCAAAATCATCA AGAGGAAAGTATAATTTAGAGGAAGAAAAAGTATATATTCCTGAAAAAATAGATTTTGAAAGTAAGGATA AATTGACATCAGGAACTATGTCAAAGGGAGTATTTGATGTAAAAGCTTCTGTATTTACTGGAGATAATTT TAAAGGCAAAAATAAAGAAAATGATATAAAAAGCGATAAAATGAAATATTATACAAATGAAGATAAGGTA GAATTTGGAAAAAATACTGTTATAGTAACTCCAGAAAGCAGATTAAGAGGAAATAGGCTTGACTATAATC TTAAGACAGAAATAGTCATTTCTCCTGAGAAGTATACTATAGATTATGGAGATTTTACTATAGTTGGAAG TGAAGGGACTTTTGATAATAAACAAGGACTATTAAAAAGTACAAATGCAGATATAACTTCCAAAGCTGGT GACAGATTCAAATCAGATAAAGCAGATGGAAATCTTAAAGAGATGAGAATAGATTTTATAGGAAATGCTA AGGGACATATGATTCATCAAGGAAAACGTACAGATTTTACAGGAGATTTTGCCAGAGTATATTTTAAAAA TGATGGTGGATATAAAGCAATAAGAAGTGAAATTAAAAAGAATGCAGTATTTATTCAAGAGGAGAAAAAA CTTCAATCTGATTATATTGAAGCAGATATAGAAAGAAATCTTATTTTCTCAAGGGATAATACAAAACTTA CAGTAACTGATGCTAAAAATGGAGATACAATTGTAACCTCTGATACTGCTGAAATAGATATAAACAGAGA TATAGCTACTTTAGTTGGAAATGTTTACATTGAAAATAAAAATCCTGAACAGGGAATTACCATTATTACT GCTGAAAAAGGAATAATTAGGCAAAAAACTGGTATACTTGACCTTATGGGAAATGTAAAAATTGAAAATA AAGAATCTATAATAGAAGCAGATGAAGGAACTTACAATACAAATACAAAAAAAATAAAAGCAAAAGGGCA TGTATTTATAAACCATAAAAATAATTAA

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