F. varium 27725_FusoPortal_Gene_1778

InterPro predicted function: PAS fold;RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR013767;IPR002078

Link to full Interpro analysis


Previous Gene Next Gene

Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1778.out

Amino Acids: 446

ORF FASTA file - Amino Acids

MIKITGHAKLIFDSLYDGILIIDKEGIVRYINPAYTRITKVEEKNIIGRYLSEVRPGSRL TNVVKNEKMELGAHRKMGEVEYLVNMVPIYEEGKVIGGISLLNELVDIYKLTEKLNLSKI IIQNLKEHVKTLGNGKYSFDDIIAVDEKSVEVKDFAKRIALADSNVLITGESGTGKELYA SAIHNLSPRKDFPFIPVNCASFEKNLIESELFGYEEGAFTGAKKNGKTGLFQLAQGGTLF LDEIGELEYGLQGKLLRVLQEKSIRKIGGSKEIPIDVRLICATNKNLEKMIQDNTFRRDL YYRIAIMPLSILPLREKKNDIKSIAEKFLLDLSIKYKKEVKLNENALKVLKEYDWPGNIR ELKNIIEFTFNMVEGNEIKAEHLPIAIKKNLKENDNISPLSEVVKEAEKSYLKKVIEIYG DSVEGKKKAAKALEISLATLYNKLEK

Coding DNA - Genome Coordinates: 1969789-1971129 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGATAAAAATAACAGGACATGCAAAACTTATATTTGATTCACTGTATGATGGAATACTTATAATAGATA AGGAAGGGATAGTAAGATATATAAACCCAGCTTATACAAGAATTACAAAAGTTGAAGAAAAAAATATAAT AGGAAGATATCTTTCTGAAGTACGTCCTGGAAGCAGACTTACAAATGTAGTGAAAAATGAAAAAATGGAA CTGGGAGCTCACAGAAAGATGGGGGAAGTAGAATACCTTGTAAATATGGTACCTATTTATGAAGAGGGGA AAGTTATAGGAGGAATATCTCTTCTTAATGAATTGGTAGATATCTATAAGCTTACAGAAAAACTTAATCT TTCTAAAATAATAATTCAAAACTTAAAAGAGCATGTAAAAACATTAGGAAATGGAAAATATAGTTTTGAT GATATCATTGCTGTAGATGAAAAAAGTGTAGAAGTAAAAGATTTTGCTAAGAGAATAGCCCTTGCTGATT CTAATGTATTGATAACTGGAGAGAGTGGGACAGGAAAGGAACTTTATGCAAGTGCAATACATAATTTAAG TCCAAGAAAAGATTTTCCATTTATTCCTGTAAATTGCGCTTCTTTTGAAAAGAATCTCATAGAGAGCGAA CTTTTTGGCTATGAAGAAGGAGCTTTTACTGGAGCAAAGAAAAACGGAAAAACAGGATTATTCCAACTTG CACAGGGAGGGACTTTATTTTTAGATGAAATAGGGGAGCTTGAATACGGATTACAGGGGAAACTTCTTAG AGTACTTCAGGAAAAAAGTATAAGGAAAATTGGAGGCTCAAAAGAGATACCAATAGATGTGAGGTTGATT TGTGCTACCAATAAAAACTTAGAAAAGATGATACAAGATAATACTTTTAGAAGAGATCTTTATTATAGGA TAGCAATAATGCCTTTATCCATACTTCCGTTGAGAGAAAAGAAGAATGATATAAAATCAATAGCTGAAAA ATTTCTTTTGGATTTATCTATAAAATATAAAAAAGAAGTAAAATTAAATGAGAATGCTTTAAAGGTCTTA AAAGAATATGACTGGCCGGGAAATATTAGAGAGTTAAAAAATATTATTGAATTTACATTTAATATGGTTG AAGGAAACGAGATAAAAGCTGAGCATCTTCCAATAGCCATAAAAAAGAATCTTAAAGAAAATGATAATAT ATCTCCTCTTAGTGAAGTAGTCAAAGAAGCAGAAAAGAGTTATTTAAAAAAAGTAATAGAAATATATGGT GATAGTGTAGAAGGAAAGAAAAAAGCAGCTAAAGCACTGGAAATTTCTCTTGCTACTTTATACAATAAAC TTGAAAAATAG

Previous Gene Next Gene