F. varium 27725_FusoPortal_Gene_1782

InterPro predicted function: "RNA polymerase sigma factor 54;RNA polymerase sigma factor 54
InterPro Accessions: IPR000394;IPR007046;IPR007634

Link to full Interpro analysis


Previous Gene Next Gene

Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1782.out

Amino Acids: 412

ORF FASTA file - Amino Acids

MDFTLKLKQEMKLSLTQEMKISMNILQMSSSNLKDFIEKEALKNPMLEVTYSTPSSKYNS DEETTSPFDFIIEEKTLIDFLEEQLGYLKISPKIKSICEYVINNLDDRGYLSISKLEIKK ALKISTAQLKEAMDIIYTLEPAGIGAENLKESLKIQLITKDIIDEKLFTLIDDYLEELGD RKYSLISEKLHVSVEQIEDYLDIIKSLEPIPARGYFVGNRTNYVVPEAKIEIVDDELTVT LNEEAIPKIKINSSYKSTNSLSDKNNMYTAINLIKSIEKRYITLERVLNQLIVKQKNFFF RGKDFLQTLTLKDIAKELNLHESTISRAIRDKFIETPQGIIAIKSLFILNSECLEIKKTI EELIKSENKSSPLSDEKISLYFKNKGCSIARRTIAKYREELGIPSTRERKRK

Coding DNA - Genome Coordinates: 1975914-1974676 | Orientation: Reverse

ORF FASTA file - Coding DNA

TTGGATTTCACTTTAAAATTAAAACAAGAAATGAAGCTTTCTCTGACACAAGAAATGAAAATTTCTATGA ATATACTTCAAATGTCTTCATCTAACCTAAAAGATTTTATTGAAAAAGAAGCCTTAAAAAACCCAATGTT AGAAGTAACATACTCTACTCCCTCATCTAAATATAATTCTGATGAAGAAACTACTTCACCTTTTGACTTT ATTATTGAAGAAAAAACTTTAATTGACTTTCTAGAAGAGCAACTTGGATATTTAAAAATTTCACCTAAAA TAAAATCTATTTGTGAATATGTAATAAATAATCTAGATGATAGAGGATACCTTTCCATATCTAAATTAGA AATAAAAAAAGCTCTTAAAATTTCTACAGCCCAACTGAAAGAGGCTATGGATATTATATATACATTAGAA CCTGCTGGTATTGGTGCAGAAAATTTAAAAGAAAGTCTAAAAATACAGCTTATAACAAAAGATATTATTG ATGAAAAGCTCTTTACCCTTATAGATGATTATTTAGAAGAACTAGGAGATAGAAAATATTCCCTCATAAG TGAAAAATTACATGTATCAGTTGAACAAATAGAAGATTATCTTGATATAATAAAATCATTGGAACCTATC CCTGCAAGAGGATATTTTGTAGGAAATAGAACAAATTATGTAGTTCCAGAAGCTAAAATAGAAATAGTTG ATGATGAATTAACAGTTACATTAAATGAAGAAGCTATACCTAAAATAAAAATAAACAGTTCATATAAATC TACAAATTCATTATCTGATAAAAATAATATGTATACAGCTATAAATCTGATTAAAAGTATTGAAAAAAGA TATATCACTCTTGAAAGAGTTTTAAATCAACTTATAGTAAAACAAAAAAATTTCTTTTTTAGAGGAAAAG ACTTTTTACAAACTTTAACTTTGAAAGATATAGCAAAAGAATTAAATCTTCATGAATCTACTATTTCTAG AGCAATTAGAGATAAATTTATAGAAACTCCTCAGGGAATAATAGCTATAAAATCTCTTTTCATATTAAAT TCTGAATGTCTTGAAATAAAAAAAACTATAGAAGAACTCATAAAATCTGAAAATAAATCTTCACCTTTAT CTGATGAAAAAATATCCTTATACTTCAAAAATAAAGGCTGTAGCATTGCCCGAAGAACCATAGCAAAATA TAGAGAAGAACTTGGAATTCCTTCTACCAGAGAAAGAAAAAGAAAATAA

Previous Gene Next Gene