F. varium 27725_FusoPortal_Gene_1803

InterPro predicted function: Tetratricopeptide repeat;Transglycosylase SLT domain 1
InterPro Accessions: IPR019734;IPR008258

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1803.out

Amino Acids: 615

ORF FASTA file - Amino Acids

MKKIFMILFFIINSSIAFTYTYEDYDIFIQGKNAYRNGNYEEAQSKFETLLKSYSFSPIL KNNYAFYFIGMTYYKMGEWKNAVYYLEKAVFSHKLSFFNRGSEIEKNIYFAERDYSLGDA LIKMGNKETGLLYLKRLDYSTFSPITSHFEEKALELLAKEDIHYQNYYNLKYKNDFSHVG EIPTSELLKAAHFFLSKKEYEKAKKLYKIILKTPNITVQDKEKAESELFRTLIISGKNKE IIALADEYGKNGNKDLYFFYKGLAYYRLKDFSRCLYAFENVKGNRYASLALFYRTGIYYS FGDYDQVLKTAAKIPNKNIITEIMIANSYLKLGNNKLFEKKAESIIKKYPNSYEGMFYSF LLKNKDIDINKHNSVFKIGLILDNLLVNCKNIDENFISTVDKIEIEKISAIASMKDEELI KIEIENSSFINKYSIQNGYAITTILEKGEFFDLAYKNSSTYRKSFFEYKDLIKYNYPLYY KNIVDINSKKYDVPQELIYSAMLISSKFNKRLLSENSKIGLMQIPYESSKDIISLFDPQI NIAIGTEKLKSLLESYKGNKLKSLIAYIYGEELLNRIQFDYDGDLNLDLITDPEERYELQ NLILTYMFYKKLYNF

Coding DNA - Genome Coordinates: 2000063-1998216 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAAAAAAATATTTATGATTTTATTTTTTATTATAAATAGCTCCATAGCTTTTACTTACACTTATGAAG ATTATGATATTTTTATTCAAGGAAAAAATGCTTATCGTAATGGCAACTATGAAGAAGCCCAAAGTAAATT TGAAACACTTTTAAAAAGCTATTCCTTTTCTCCTATTTTAAAAAATAATTATGCTTTCTATTTTATAGGA ATGACTTATTATAAAATGGGAGAGTGGAAGAACGCTGTTTACTATCTTGAAAAAGCTGTTTTCAGTCATA AACTTTCTTTTTTTAACAGAGGATCAGAGATTGAAAAAAATATTTACTTTGCTGAAAGAGATTATTCTCT TGGTGATGCTCTCATAAAAATGGGAAATAAAGAAACTGGGCTGCTATATTTAAAAAGACTGGACTACTCT ACTTTTTCTCCTATTACTTCACATTTTGAAGAAAAAGCTCTTGAATTGCTTGCAAAAGAAGATATTCACT ATCAAAATTATTACAATCTTAAATATAAAAATGATTTCTCTCATGTTGGAGAGATTCCAACATCTGAACT TTTAAAAGCTGCTCATTTTTTCCTTTCAAAAAAGGAATATGAAAAAGCTAAAAAACTTTATAAAATAATT TTAAAAACTCCCAATATTACAGTACAAGATAAAGAAAAAGCTGAATCTGAGCTTTTTAGAACTTTAATCA TCTCTGGCAAAAATAAAGAGATTATTGCTTTGGCAGATGAATATGGAAAAAATGGAAATAAGGATTTATA TTTTTTCTATAAAGGGCTTGCCTACTATAGATTAAAAGATTTTTCAAGATGTCTTTATGCTTTTGAAAAT GTAAAAGGAAACAGATATGCTTCTCTTGCATTATTTTATAGAACAGGTATATATTATTCCTTTGGTGATT ATGACCAAGTATTAAAAACAGCTGCTAAAATACCAAATAAAAATATAATAACAGAAATAATGATTGCCAA TTCCTACTTAAAACTTGGAAATAACAAACTTTTTGAAAAAAAAGCTGAAAGCATCATAAAAAAATATCCT AATTCATATGAAGGAATGTTTTATTCATTTCTCTTAAAAAATAAGGATATTGACATAAATAAGCATAATT CGGTTTTTAAAATTGGATTGATACTTGACAATCTTCTTGTAAACTGTAAAAATATAGATGAGAATTTTAT CAGCACAGTAGATAAAATAGAAATTGAAAAAATATCAGCCATTGCTTCTATGAAAGACGAGGAACTTATT AAAATAGAAATTGAAAATAGTAGTTTTATTAATAAATATTCTATTCAAAATGGTTATGCAATAACTACAA TTCTTGAAAAGGGAGAGTTTTTTGATCTTGCTTATAAAAATTCTTCTACATACAGAAAAAGTTTTTTTGA ATATAAAGATTTAATAAAATATAATTATCCTTTGTATTACAAAAATATAGTTGATATAAATTCAAAAAAA TATGATGTCCCTCAAGAACTTATTTATTCTGCAATGCTTATTTCCAGCAAATTTAATAAAAGGCTTTTAT CAGAAAATTCCAAAATAGGTCTTATGCAGATTCCATATGAATCAAGTAAAGATATAATTTCTCTTTTTGA TCCTCAAATAAATATAGCAATTGGAACTGAAAAGTTAAAATCTCTTCTTGAATCTTATAAAGGAAATAAG CTTAAATCTCTTATAGCATATATTTATGGGGAAGAACTTCTCAATAGAATACAATTTGATTATGATGGAG ATTTGAATTTAGATTTAATAACTGATCCAGAGGAGCGATATGAACTGCAAAACCTAATACTTACATATAT GTTTTATAAAAAATTATACAATTTTTAA

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