F. varium 27725_FusoPortal_Gene_1834

InterPro predicted function: "DNA binding HTH domain
InterPro Accessions: IPR018060;IPR003313

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1834.out

Amino Acids: 257

ORF FASTA file - Amino Acids

MSEKRKIDFFHYLNTGIELVISENTADTYPLHNHISVFIIGMILNGEINLRISEKFYNYK SNQIFIIPPYVPHEIKSLSSYSLLSICINKNLLKKEGIAGIQKIISPILENILRSKRISQ KEADLLSNRLKILEKYTNIDEDRDRELEKIKKYLEIFPENILTIDEMADIAFSSKFNFIR KFKKRIGLTPHQFQIQNRIRKAQKLLEKSFVTSEVALTTGFYDQSHFIRNFKKIVKMTPL EYRSSINRIHFFKEEGE

Coding DNA - Genome Coordinates: 2028993-2029766 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGTCAGAAAAAAGAAAGATAGATTTTTTCCATTATTTGAATACTGGAATAGAATTAGTCATAAGTGAAA ATACTGCAGATACCTACCCTCTGCATAATCATATATCTGTTTTTATTATTGGAATGATATTAAATGGTGA AATAAATCTTAGAATATCAGAAAAGTTTTACAATTACAAATCAAATCAAATTTTTATAATTCCCCCATAT GTTCCCCATGAAATAAAATCTTTAAGTTCATATTCTCTTTTAAGTATATGTATAAATAAAAATTTATTAA AGAAAGAAGGAATTGCAGGAATTCAGAAGATAATATCTCCTATATTGGAAAATATTTTAAGAAGTAAGAG AATATCTCAAAAAGAAGCTGACTTACTTTCAAATAGATTAAAAATTTTAGAAAAATATACAAATATTGAC GAAGATAGAGATAGAGAGTTGGAAAAAATAAAGAAATATTTGGAAATATTTCCAGAAAATATTTTAACTA TAGATGAAATGGCAGATATTGCATTTTCAAGCAAGTTTAATTTTATAAGAAAATTTAAAAAAAGAATAGG ACTTACTCCACATCAGTTTCAGATACAAAATCGTATAAGAAAGGCTCAGAAACTTTTAGAAAAATCTTTT GTAACATCAGAAGTGGCTTTAACCACAGGTTTTTATGATCAAAGCCACTTTATAAGAAATTTTAAAAAAA TAGTAAAAATGACACCATTAGAATATCGGTCTTCTATTAATAGAATTCATTTTTTTAAAGAAGAGGGGGA ATAA

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