F. varium 27725_FusoPortal_Gene_1875

InterPro predicted function: "Mga helix-turn-helix domain;Helix-turn-helix
InterPro Accessions: IPR007737;IPR013196

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1875.out

Amino Acids: 469

ORF FASTA file - Amino Acids

MILTKRSLKIINLFLTGNKFTIDELADFFSITNRTVANNIKTIKNFLKSNNLNSLVENNG VYYIKNKDSSLISHLISKEIITVEERKEYIILKLLTDNLITLNPIAEELGITRRALNYDM IDIKEFFSKKNIELVPVAGKGVTLVGKEADMRQLLSQFIEKLLIKKGNINKIFQKFLKVF NENCSISLIDRMLMEVTRGINITLPPESFYYVIGIILSGKLRKNFKDDSLKIENNSHSQK YQNLKEKLLNNIHIPIEDYETDQIITVFLDSDIETYKGEYKLKPEIENFLSILKEKLNVA FTIDENFLMILSYSFKLSNYKAEFNISQHQKKISHIPDSCEDIFKIVDEFTKKVFRQFHT DDLLFITLLLKNHILKSNGLKTSSKNILIIDNSIKHFLGKLVSKYLKNFYKINNITIISS YELDCFFSSNINPDLILTLDNSKINTNIPIIKLDFAELWPNLNFLEYYF

Coding DNA - Genome Coordinates: 2068846-2067437 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGATTTTAACAAAGCGTTCTCTTAAAATTATTAACTTATTCCTCACTGGAAATAAGTTTACAATTGATG AACTTGCAGATTTTTTTTCTATAACCAATAGAACTGTAGCAAATAATATAAAAACAATTAAAAATTTTTT AAAAAGTAATAATTTAAATTCCTTAGTAGAAAATAATGGTGTTTACTATATTAAAAATAAAGATTCAAGC TTAATTTCTCATCTCATTTCAAAAGAAATTATAACTGTAGAAGAAAGAAAAGAATATATTATATTAAAAC TACTTACAGATAACCTTATAACGTTGAATCCAATAGCTGAAGAGCTTGGGATAACAAGAAGAGCTCTTAA CTATGATATGATAGATATAAAAGAATTTTTTTCCAAAAAAAATATTGAACTCGTCCCTGTTGCTGGGAAA GGAGTTACCTTAGTTGGAAAAGAAGCTGATATGAGGCAGCTTCTTAGCCAATTTATAGAAAAGTTATTGA TAAAAAAAGGTAATATAAATAAAATATTTCAAAAATTCTTAAAGGTATTCAACGAAAATTGTAGTATATC CCTAATAGATAGAATGCTTATGGAAGTGACAAGAGGTATAAATATTACTCTTCCTCCAGAAAGTTTCTAT TATGTTATAGGCATTATATTATCTGGAAAATTAAGAAAAAATTTCAAGGATGATTCTTTGAAAATAGAAA ATAATTCTCATTCTCAAAAATATCAAAATCTTAAAGAAAAATTATTAAACAATATCCATATACCTATTGA AGATTATGAAACTGACCAAATCATAACAGTTTTTCTTGATTCTGATATTGAAACTTATAAAGGAGAGTAT AAGCTAAAACCAGAGATTGAAAACTTTCTTTCTATTTTAAAAGAAAAATTAAATGTTGCTTTTACTATTG ATGAGAATTTTTTAATGATACTTTCATATTCATTCAAGCTTTCCAATTACAAAGCTGAATTTAATATAAG TCAGCATCAAAAAAAAATCTCACATATTCCTGATTCATGTGAAGATATTTTTAAAATTGTAGATGAATTT ACTAAAAAAGTTTTTAGACAATTTCATACTGATGATCTTCTCTTCATAACTTTGCTATTAAAAAACCATA TTTTAAAGTCAAATGGTTTAAAAACAAGCAGTAAAAATATTTTAATAATAGATAATTCTATTAAACATTT TTTAGGAAAACTTGTTTCAAAATATCTTAAAAATTTTTATAAGATAAATAATATAACTATAATTTCAAGT TATGAATTAGATTGTTTCTTTTCATCTAATATTAATCCTGACTTGATTCTAACTCTTGACAATAGTAAAA TAAATACAAATATTCCTATAATTAAACTTGATTTTGCAGAATTATGGCCTAATCTAAATTTTTTAGAATA TTACTTTTAA

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