F. varium 27725_FusoPortal_Gene_1951

InterPro predicted function: "RNA polymerase sigma factor 54 interaction domain;DNA binding HTH domain
InterPro Accessions: IPR002078;IPR002197

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_1951.out

Amino Acids: 464

ORF FASTA file - Amino Acids

MELIKNLFGEKGYIDGITIIDTKGEILFTVKFNSKLNSNSEDYEVIGKNFYEIYENLSGN KSSMYKAMELEMPIYIKNQKLKPKNHKEILISSLSIPIKSGGRIVGAIDLSSEEISDSKK FEKDTEISLDELKKINLRNLSLNKNGAKYTLNDIITNNFEMKQLKEFIKTISDSYLPVMI YGETGTGKELFAQAIHNESKRKDRPFIAQNCAAIPENLLESIFFGTAKGAFTGAVDSPGL LETADGGTIFLDEINSMPMNLQSKLLRALQENKIRRIGAKDTIDINVKIIAALNKDPMKA IEDKELRMDLYYRLSVLNITIPPLRERKDDISVLVNYFVAKYNELLEKNVRYISSDICQT FQTYDWPGNIREIEHIVAFGMSVIRPDQEKLEFSDLERKWIEITGKKKHKTELPAKDLKT MVEEYEKSVIEKVLEVSAHNITKASLILKIPRQTLQRKIKQYEL

Coding DNA - Genome Coordinates: 2149394-2150788 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAACTTATAAAAAATCTTTTTGGGGAAAAGGGTTATATTGATGGAATAACAATTATAGATACAAAAG GGGAAATATTGTTTACTGTTAAGTTTAATAGTAAGCTTAATAGTAATAGTGAAGATTATGAAGTAATAGG AAAGAATTTTTATGAAATATATGAGAATCTTTCTGGGAATAAAAGCAGTATGTATAAAGCTATGGAATTA GAAATGCCTATATATATTAAAAATCAAAAATTGAAACCAAAGAATCACAAAGAAATATTGATATCATCAC TATCAATCCCCATAAAATCAGGAGGCAGGATAGTAGGGGCTATTGATTTATCTTCAGAAGAAATAAGTGA TTCTAAAAAGTTTGAAAAAGATACTGAAATAAGTTTAGATGAATTAAAAAAAATAAATTTAAGAAATCTT TCTTTAAATAAGAATGGTGCTAAATATACCCTTAATGATATTATTACTAATAACTTTGAAATGAAACAGT TAAAGGAGTTTATAAAAACAATATCTGATTCATATCTACCAGTAATGATTTATGGAGAAACAGGAACAGG AAAAGAACTTTTTGCTCAGGCTATACATAATGAAAGTAAGAGAAAAGACAGACCTTTTATAGCTCAAAAC TGTGCAGCTATACCAGAGAATCTTCTTGAGAGTATATTCTTCGGAACAGCTAAAGGTGCTTTTACAGGAG CAGTAGATAGTCCAGGATTATTAGAAACAGCTGATGGAGGAACTATTTTTTTAGATGAAATCAATTCCAT GCCAATGAATCTGCAATCAAAATTATTAAGAGCATTGCAGGAGAATAAAATAAGAAGAATAGGAGCAAAG GATACAATAGATATAAATGTAAAAATAATTGCAGCATTGAATAAAGATCCTATGAAGGCTATAGAAGATA AAGAATTGAGAATGGATCTTTACTATAGACTTAGTGTTTTGAATATAACTATTCCACCTTTGAGAGAGAG AAAAGATGACATATCTGTCCTTGTAAATTATTTTGTTGCTAAGTACAATGAACTTCTTGAAAAAAATGTC AGGTATATTTCCAGTGATATATGTCAGACATTTCAAACATATGATTGGCCAGGTAATATAAGGGAAATAG AACATATAGTAGCTTTTGGTATGAGTGTTATAAGACCAGATCAAGAAAAACTTGAATTTTCAGATTTAGA AAGAAAATGGATAGAGATAACAGGAAAGAAAAAACACAAAACAGAGCTACCAGCTAAAGACTTAAAAACA ATGGTAGAGGAATATGAGAAAAGTGTAATAGAAAAAGTACTGGAAGTGTCAGCACATAATATAACAAAAG CTTCATTAATATTAAAAATACCAAGACAGACTTTACAAAGAAAAATAAAACAATATGAACTATAA

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