F. varium 27725_FusoPortal_Gene_2015

InterPro predicted function: "Transcription regulator HTH
InterPro Accessions: IPR000524;IPR004839

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2015.out

Amino Acids: 466

ORF FASTA file - Amino Acids

MAKNTNNVDTSYYIQLYEILKTEIIKKNAPNSKFYSIRQIGIKYNTNINTVLKVFKMLER DGYIFSEKGKGFFIKEHSNLSISEELVPIMESFHYGQTNTEGINFSNGSPPNDYFPDKIY QKLIDKALKNYGSSLLGYQDVQGLESLRILLADHLEEKDIFVNKDNIMITSGTQQSLVIL LKTFSGSSLKTVAISSPTYPNALNLLKDMCNIKTFDLKNDGWNLIEFEKVLKKERIHFVY IMTNFQNPTGISWSEEKKKKLLNLAHKYNFYIIEDDCFSEFYYTKRVEPLKILDQTGNEK VIYIKTYSKILMPAIGLAYMILPPAIMQKAILTKYSLDHSTSGLNQKVLEYFITDKYLDN HVKKLKKIFKAKHHRILELLSEVPHITILNKSKGGFFIWIQLADYINEEKFYYKCKLRGV SILPGNIFYHDKRSSGKIRLSFISPSLKELEEGIEIMKDILIHCDF

Coding DNA - Genome Coordinates: 2225081-2223681 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGCTAAAAATACTAACAATGTTGATACTAGTTACTACATACAGTTATATGAGATTCTTAAAACAGAAA TAATAAAGAAAAATGCTCCCAACTCTAAGTTTTATTCTATAAGGCAAATTGGAATAAAATATAATACAAA TATCAATACAGTTCTAAAAGTATTTAAAATGTTAGAAAGAGATGGATATATTTTTTCTGAAAAAGGAAAG GGTTTCTTTATAAAAGAACATTCTAATCTTTCTATAAGTGAGGAATTGGTTCCCATAATGGAAAGCTTTC ATTATGGACAAACCAATACAGAAGGAATAAATTTTTCTAATGGAAGTCCTCCAAATGATTATTTTCCTGA TAAAATATACCAAAAATTAATAGATAAAGCATTAAAAAATTACGGTTCCTCTCTATTAGGCTACCAAGAT GTACAAGGATTGGAAAGTCTTCGTATTCTTTTGGCTGATCATTTAGAAGAAAAAGATATTTTTGTTAATA AGGATAATATAATGATTACATCAGGAACTCAGCAGTCCTTAGTTATCTTGCTGAAAACTTTCAGTGGTTC ATCTTTAAAAACTGTTGCTATATCCAGTCCTACATACCCCAATGCCCTAAATCTTCTAAAAGATATGTGC AATATAAAAACTTTTGATTTAAAAAATGATGGCTGGAATTTAATAGAATTTGAAAAAGTTTTAAAAAAAG AAAGAATCCATTTTGTATATATAATGACTAATTTTCAAAATCCTACTGGTATAAGCTGGTCAGAGGAAAA GAAGAAAAAACTTTTGAATCTTGCTCATAAATATAATTTTTATATCATTGAAGATGATTGTTTTTCTGAA TTCTACTATACAAAAAGAGTTGAACCATTAAAAATATTAGATCAGACTGGAAATGAAAAAGTTATTTATA TAAAAACCTATTCAAAAATTCTTATGCCTGCCATTGGACTTGCATATATGATTTTGCCCCCTGCTATTAT GCAGAAAGCTATTTTAACTAAATATAGCCTAGACCATAGTACTTCTGGATTAAATCAAAAAGTATTAGAA TATTTTATCACTGATAAATACCTTGATAACCATGTGAAAAAATTAAAAAAAATATTTAAAGCTAAACATC ATAGAATTCTTGAATTATTATCTGAAGTTCCTCATATAACTATATTAAATAAGTCTAAAGGTGGATTTTT TATCTGGATACAATTAGCTGATTATATAAATGAAGAAAAGTTCTATTATAAATGTAAATTAAGAGGAGTT TCCATTCTTCCAGGTAATATTTTTTATCATGATAAACGTTCTTCTGGCAAAATAAGATTGAGTTTTATCT CTCCATCTTTAAAAGAATTAGAAGAGGGAATAGAAATTATGAAAGATATTTTAATTCATTGTGATTTTTA A

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