F. varium 27725_FusoPortal_Gene_2076

InterPro predicted function: PAS fold;RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR013767;IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2076.out

Amino Acids: 489

ORF FASTA file - Amino Acids

MGKKGYGFLFKGKKETKSLKDEIIENTYVNKMMKSIVDSSYDGIYVTDGEANTLLVNKSY GRITGLNIEELIGKNMKDLVEAGVYDNSGSLAVIETGKEATVNQKLSSGKEILVTSVPVF DENGAIKYIVTNVRDLSEMERLRRELFLNQNLTQKYKDELENMKEQLVDIDDITFRDKSM FNTLKMILKISKMDTSVLLTGETGTGKTHIAKLIHKYSNRNEKTFIEINCGAIPESLIES EFFGYEAGAFTGASKKGKMGVFELANNSTLFLDEISELNIDLQVKLLKVLESLEVRRIGG EKIIQTNARIIAATNRNLRELIKEGKFREDLYYRLNVLSINIPSLKERKDDIIPLCLRFL KEFNEKYNVEKFFNKEIIEVFYRYQWPGNIREMRNLIEQLVIISQGNEISTDYLPKYIFQ NGTLESLYEKTEKADEFFQYYKMSLKEATLKFQQNLIKNMLKEKGSQRQVAKALQVDPAT ITRKLTGRE

Coding DNA - Genome Coordinates: 2300679-2302148 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGGGAAAAAAGGGTATGGGTTTTTATTCAAGGGGAAAAAAGAAACAAAATCTTTAAAAGATGAGATTA TAGAAAATACATATGTGAATAAAATGATGAAATCTATAGTTGATTCATCTTATGATGGAATTTATGTGAC TGATGGAGAGGCTAATACTCTTTTGGTAAATAAGTCATATGGAAGAATTACAGGTTTGAATATAGAGGAA TTGATTGGGAAGAATATGAAGGATTTAGTTGAAGCAGGAGTATATGATAATTCAGGTTCTCTTGCAGTAA TAGAAACAGGCAAGGAAGCTACTGTGAATCAAAAACTTTCTTCTGGAAAAGAGATACTGGTAACAAGTGT GCCAGTATTTGATGAAAATGGAGCAATAAAATATATAGTGACTAATGTGAGAGATTTATCAGAGATGGAA AGACTTCGTAGGGAATTATTCTTAAATCAAAATCTGACTCAGAAATATAAAGATGAATTGGAAAATATGA AAGAACAGCTTGTGGATATAGATGATATAACATTTAGAGATAAATCAATGTTCAATACTTTGAAAATGAT ATTGAAAATATCTAAGATGGATACTTCTGTGCTTTTGACGGGAGAAACTGGAACTGGAAAAACTCATATA GCTAAATTAATACATAAATACAGCAATAGAAATGAAAAGACATTTATTGAAATAAATTGTGGAGCTATAC CAGAAAGCCTTATAGAATCAGAATTTTTTGGATATGAAGCAGGAGCTTTTACAGGAGCATCTAAAAAAGG AAAGATGGGAGTATTTGAACTTGCTAATAATTCCACTCTGTTTTTAGATGAGATATCAGAATTAAATATA GATTTACAGGTAAAATTATTGAAAGTCTTGGAAAGTTTGGAAGTGAGGCGTATAGGGGGAGAAAAAATCA TTCAGACTAATGCAAGGATAATAGCTGCTACAAATAGAAATCTGAGGGAATTGATAAAAGAGGGAAAATT CAGGGAAGATTTGTATTACAGACTGAATGTACTGTCTATAAATATCCCATCTTTAAAAGAGAGAAAAGAT GATATAATTCCTTTGTGTCTAAGATTCTTGAAAGAGTTTAATGAAAAATACAATGTTGAAAAATTCTTCA ATAAAGAAATAATAGAAGTATTCTACAGATATCAATGGCCTGGAAATATAAGAGAAATGAGGAATCTCAT AGAACAATTAGTAATAATATCTCAAGGAAATGAAATTTCTACTGACTACCTTCCTAAATATATTTTTCAA AATGGAACTTTAGAGAGCCTATATGAAAAAACAGAGAAGGCTGATGAATTTTTCCAATATTATAAAATGA GCTTAAAGGAGGCTACTCTTAAATTTCAGCAGAATCTTATTAAAAATATGCTCAAGGAAAAAGGTTCACA AAGGCAGGTTGCAAAAGCACTTCAGGTAGATCCAGCAACAATTACAAGGAAGCTCACAGGCAGGGAATAA

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