F. varium 27725_FusoPortal_Gene_211

InterPro predicted function: Autotransporter beta-domain
InterPro Accessions: IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_211.out

Amino Acids: 1088

ORF FASTA file - Amino Acids

MIEKIMKAVKSSNKRRGRNITIGAVVGFLLSCTAVMGTVDGNYLFIKDDSGIKFSTDGNE WNNTNPYAENNWLESTKTYINNTILSANGTGDEAYGVKLELNSPNFRFINNGAINGSSNS NKAYGIYVNDGKVESIENNGTINGSSNSSSAYGIYVNYVNYGRVGNIENNGVITGNSGGS GYSIGIGIYGRGAATQIINRGIINNKISPNDNSSTNSSGIAAGSNSEGTEKIINIGEINS SNNGNAFTTGIHVGKKAREVINMGNIKTFDAKYSYGISSYNLGTSAQINNLLNMGTISSF NTSNSIGIFSADNGTIEKIVNTGVIYGQNSTVSIGATGTIGDVNNYGIFATDGDKIIFNN NGNMTGTENNYGMYITKTNGQITINVDDEKSNYSGNIVVGYNEDGSEITKYMTIRNAKLN KEKTETESFILAGKSGKYNNSILNGKDKTLNVLEGRNKITDSIINAYQTAVVIKGKNSSL VLNNTVVNGGAAKDKEVPTIEIEGEDNAFTLKGESIVNTGARDNVAITVGGKDNALVLEG NAKVNGEMKSTGTNNLISLNGNTGNGMNILHNISGFTNMNIDNNVTFFENVEVTGTETVT VGGTLNLRLKKSEPIPYGDIPTAVHAFSGTNSTTIKGASEEEAGTLNFITNGIGREIYVD MENIELENMKVRANSIIDKVEISDEYIHLGAGSDLSGIVNPKVSKYDSLDNIYKSLYSST EENLDALRDILSMTYLGTHYGYNTSNEEQLKNLMSYLDSIYTGTPYSVSSELSRRSAGMF RDIVTENQFRPDLNRWLVMGGLTHTDGGTKDSYYGQNYHGFDTGTADVDTDMKLTGAYAL GKYGYSENVSLGVTAGGNKSEAKLPMSKVKGNSGYVGAFAENYRGNLTLKAGAGIQYSEY DANRAALGGHSYSDKYSDMTYDIYLNGRYSNPMGDNFFLEPYGTLSYTYVDQEGADEGSK VLAIETDSKSFDYTAAKVGVDLKKVIPHEKGKSTLSAGVSYTRLLNGADKDNITGRFKGK DASDFDILVAHKNENSIGLNAKYTLELESGILFDVKGSYSVERDSHNGTGKNRNKGEWIV GTGLGYKF

Coding DNA - Genome Coordinates: 231698-228432 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGATTGAAAAAATTATGAAGGCAGTAAAAAGCAGCAACAAAAGAAGAGGAAGAAATATAACAATAGGAG CAGTAGTAGGATTTCTATTGTCATGTACAGCAGTAATGGGAACAGTAGATGGTAATTACTTGTTTATAAA AGATGATAGTGGAATAAAATTTAGTACTGATGGAAATGAATGGAATAACACAAATCCATATGCTGAAAAT AACTGGCTTGAAAGTACAAAAACATATATAAATAATACAATACTATCAGCCAACGGAACAGGAGATGAGG CTTATGGAGTGAAATTAGAATTGAACTCACCTAATTTTAGATTTATAAACAATGGAGCAATAAATGGAAG TTCTAATTCAAACAAAGCTTATGGAATATATGTTAATGATGGAAAAGTAGAAAGTATAGAAAACAATGGG ACAATAAATGGAAGTTCTAATTCAAGCAGTGCTTATGGAATATATGTTAATTATGTTAATTATGGAAGAG TAGGAAATATAGAAAACAATGGAGTAATAACTGGTAATTCTGGAGGTTCTGGTTATAGTATTGGAATTGG AATATATGGCAGAGGGGCAGCAACTCAGATAATAAATAGGGGTATAATAAATAACAAAATAAGTCCAAAT GATAATTCTAGCACTAATAGTAGTGGAATAGCTGCAGGTTCAAATTCAGAAGGAACAGAAAAAATAATTA ATATAGGAGAAATAAATAGTTCTAATAATGGAAATGCCTTTACTACTGGGATACATGTTGGGAAAAAAGC AAGAGAAGTGATAAATATGGGAAATATAAAGACTTTTGATGCTAAGTATAGCTATGGAATATCTTCTTAT AATCTTGGTACTAGTGCCCAAATAAATAATCTATTAAATATGGGAACTATAAGTTCTTTTAATACATCTA ATAGTATTGGAATTTTTAGCGCTGATAATGGAACAATAGAAAAAATAGTAAATACAGGAGTTATTTATGG GCAGAATAGTACTGTATCTATTGGCGCTACTGGGACTATAGGAGATGTAAATAACTATGGAATATTTGCA ACAGATGGAGATAAGATTATATTTAATAATAATGGAAATATGACAGGTACTGAAAATAACTATGGAATGT ATATAACTAAAACAAATGGACAAATAACTATAAATGTAGATGACGAAAAGAGTAATTATTCTGGTAATAT AGTAGTAGGATACAATGAAGATGGAAGTGAAATAACAAAATATATGACAATAAGAAATGCTAAATTAAAT AAAGAAAAAACTGAAACAGAAAGTTTTATACTTGCAGGAAAATCAGGAAAATATAATAATTCAATATTAA ATGGGAAAGATAAGACTTTAAATGTTTTAGAAGGAAGAAATAAAATAACAGACTCTATAATCAATGCATA TCAAACAGCAGTAGTTATAAAGGGAAAAAACTCATCACTTGTTCTTAATAATACTGTAGTAAATGGTGGG GCAGCAAAAGATAAAGAGGTACCAACAATAGAGATAGAAGGAGAAGATAATGCTTTCACTCTAAAGGGAG AATCAATAGTAAATACAGGGGCAAGAGATAATGTAGCTATAACAGTTGGAGGAAAAGATAATGCTCTTGT TTTAGAAGGAAATGCAAAAGTTAATGGAGAGATGAAATCAACAGGAACTAATAATCTAATAAGTCTTAAT GGAAATACTGGAAATGGAATGAATATACTTCATAACATATCAGGATTTACAAATATGAATATAGATAATA ATGTGACATTCTTTGAAAATGTAGAAGTAACAGGAACAGAAACAGTAACTGTAGGAGGAACATTAAATTT AAGATTAAAAAAATCAGAGCCTATACCATATGGAGATATACCAACAGCAGTTCATGCTTTTTCAGGAACT AATAGTACAACAATAAAAGGAGCATCAGAAGAGGAAGCAGGAACTTTAAACTTCATAACAAACGGAATAG GAAGAGAAATTTATGTTGATATGGAAAATATAGAACTTGAAAATATGAAGGTGAGAGCAAATTCAATTAT AGACAAGGTAGAAATATCTGATGAATATATTCATTTAGGAGCAGGTTCAGACTTAAGTGGAATTGTAAAT CCAAAGGTAAGTAAATATGATTCATTGGATAATATATATAAAAGTTTGTACAGCAGTACAGAAGAAAACC TTGATGCTTTGAGAGATATATTAAGTATGACTTATCTAGGAACACATTATGGATATAATACTAGTAATGA AGAACAACTTAAAAATCTAATGAGCTACTTAGACAGCATTTATACAGGAACTCCATATTCAGTTTCAAGT GAACTTTCAAGAAGATCAGCAGGAATGTTTAGAGATATAGTAACAGAAAATCAATTTAGACCAGACTTAA ACAGATGGCTGGTAATGGGTGGACTAACTCATACTGATGGAGGAACTAAAGACAGCTACTATGGACAGAA TTACCATGGCTTTGATACAGGTACAGCAGATGTAGATACTGATATGAAACTTACTGGAGCTTATGCCCTG GGGAAATATGGATATTCAGAAAATGTATCATTAGGAGTAACAGCAGGAGGAAACAAAAGCGAAGCTAAAC TTCCAATGTCAAAGGTAAAAGGAAACAGTGGATATGTAGGAGCCTTTGCAGAAAACTACAGAGGAAACCT TACACTGAAAGCTGGAGCAGGAATTCAATATTCAGAATATGATGCTAATAGAGCAGCATTAGGAGGACAC AGCTATAGCGATAAATATTCAGATATGACATATGATATTTACTTGAATGGAAGATATTCTAATCCAATGG GAGATAACTTCTTCTTAGAGCCATATGGAACATTATCATATACATATGTAGACCAAGAGGGAGCAGATGA AGGAAGCAAAGTATTAGCAATAGAAACAGATTCAAAATCATTTGACTATACAGCAGCAAAAGTGGGAGTA GATCTTAAAAAAGTAATACCACATGAGAAAGGAAAGAGTACACTGTCAGCAGGAGTAAGCTACACAAGAC TTCTTAATGGTGCAGATAAAGATAATATCACAGGAAGATTTAAAGGAAAAGATGCAAGTGATTTTGATAT TCTAGTAGCTCACAAAAATGAAAACAGCATAGGATTAAATGCTAAGTACACTCTTGAACTTGAAAGTGGA ATCCTGTTTGATGTAAAAGGAAGCTACTCAGTAGAAAGAGATTCACACAATGGAACTGGAAAGAACAGAA ACAAAGGTGAATGGATAGTAGGAACAGGATTAGGATACAAGTTCTAA

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