F. varium 27725_FusoPortal_Gene_2146

InterPro predicted function: Autotransporter beta-domain
InterPro Accessions: IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2146.out

Amino Acids: 1027

ORF FASTA file - Amino Acids

MIEKVMKAVKSSNKRRGRNITIGAVIGFLLSCTAVMGADDNYLWIKEDGGTIQFTKEKDT TGSGTDWGKTNPYTENNWNGSTYINNMTLSSSENNGKDANGKDISYGVRFSEDMTGLEFR NNGSIMGIGGDVTYGIYNEGTITNLINNGSIESSDGYGIYNEGTIINLVNSGFISSSDGN TAIENNATIKKLINNGSITAEGDVISSHDTIGNLLNNGSMKTSGGSGISSNADIETIMNN GLIKGSIYNQSNIISLENTGIIYEKSDEPIYNEGGTIGTANNYGILATQGNSVVYGSSIT TENNYGLYITEADGKITVDDTKSKDSVEIVVGYDKDGKEITKSMTIRNATLNGDSGEATE TVSFEFKGEVGEFDNSILNGKNETLKVSGTGNQITDSIINAYGTAVVMNENMSTLILDNT IVNGGISKDDGTVSPVNIAGNGNTLTIQGNSIINGGDTVITVSGEKNALVLEGNVKINGE MKSTGTNNLISLNGNAEDGMNILHNISGFTNMNIENNVTFFEDIKVTGTETVTVHKDGVL NLRLKRSEDTKDEEIPIGVHAFSEREGKHEMTIKGTSEGEAGTLNFITNGIGKKIDVDME NIELENMLIKASSIIDKAEIDGDYIHLGAGSDLSGIVNPKVSKYDSLNGIYKSLYSSTDE NIDALRDMLSMTYLGKNYDYNNATDEEQLKALMSYLDSIYTGTPYSVSSELSRKSMGMFR DIITENQFRPDLNRWLVMGGLTHRDGGTKDSYYGQNYHGFDTGTADVDVDMKLTGAYALG KYGYSENISLGVTAGGNRSEAKLPMSKVKGNSGYVGAFAENYRGNLTLKAGAGIQYSEYD ANRATLGGHSYSDKYSDMTYDIYLNGRYSHNIGENLFLEPYGTLSYTYIKQDSADEGSKV LAIETDSKTFDYTAAKVGVDLKKVIPHEKGKSTLSTGVSYTRLLTGSDEENITGRFKGEN ATDFDILVAHKNEHSIGLNAKYTLELESGILFDVKGSYNVERDSHNGNGKNRNKGEWIIG AGLGYKF

Coding DNA - Genome Coordinates: 2368112-2371195 | Orientation: Forward

ORF FASTA file - Coding DNA

GTGATTGAAAAAGTTATGAAGGCAGTAAAAAGCAGCAACAAAAGAAGAGGAAGAAATATAACAATAGGTG CAGTGATTGGATTTTTGTTGTCATGTACAGCAGTAATGGGAGCAGATGATAATTATCTTTGGATAAAAGA AGATGGGGGAACAATACAATTTACTAAAGAAAAAGATACTACTGGGTCTGGTACAGATTGGGGCAAAACA AATCCATATACTGAAAATAACTGGAATGGCAGTACATATATAAATAATATGACATTATCATCAAGTGAAA ATAATGGGAAAGATGCAAATGGAAAGGATATAAGTTATGGAGTTAGATTTAGTGAAGATATGACTGGATT GGAATTTAGAAATAATGGTTCAATAATGGGAATAGGAGGTGATGTTACCTATGGAATTTATAATGAAGGT ACTATAACAAATCTGATAAATAATGGTTCAATAGAAAGTAGTGATGGTTATGGAATTTATAATGAAGGTA CTATAATTAACTTGGTGAATAGTGGTTTTATATCAAGTTCAGATGGTAATACTGCAATTGAGAATAATGC CACTATAAAAAAATTGATAAATAATGGTTCAATAACAGCGGAAGGGGATGTAATTTCCAGCCACGATACT ATAGGAAACTTGTTAAATAATGGTTCAATGAAAACTAGTGGTGGTTCTGGTATTAGTAGTAATGCTGATA TAGAAACTATAATGAATAATGGTTTAATTAAAGGTAGCATTTACAATCAGAGTAACATAATAAGTTTAGA AAATACAGGAATTATTTATGAAAAATCTGATGAACCTATATATAATGAGGGTGGAACTATAGGTACAGCA AATAACTATGGAATACTTGCAACACAAGGGAATTCAGTAGTTTATGGTAGTAGTATAACTACAGAAAATA ATTATGGACTATATATAACTGAAGCAGATGGAAAAATAACTGTAGATGACACTAAGAGTAAGGATTCTGT AGAGATAGTAGTAGGATATGATAAAGATGGAAAAGAAATAACAAAGTCTATGACTATAAGAAATGCTACA TTAAATGGAGATTCAGGAGAAGCAACTGAAACAGTAAGTTTTGAATTTAAAGGAGAAGTAGGAGAATTTG ATAATTCAATATTAAATGGGAAAAATGAAACTTTAAAGGTCTCAGGAACAGGAAATCAAATAACAGACTC TATAATTAATGCTTATGGAACAGCAGTAGTTATGAATGAAAATATGTCAACACTTATTCTTGATAATACA ATAGTAAATGGAGGAATTTCAAAAGATGATGGAACTGTTTCACCAGTAAATATAGCTGGAAATGGAAATA CTCTTACTATTCAAGGGAATTCTATTATAAATGGAGGAGATACAGTTATTACAGTATCAGGAGAAAAAAA TGCTCTTGTTTTAGAAGGAAATGTAAAAATTAATGGAGAGATGAAATCAACAGGAACTAATAATCTAATA AGTCTTAATGGAAATGCTGAAGATGGAATGAATATACTTCATAACATATCAGGGTTTACAAATATGAATA TAGAAAATAATGTGACATTCTTTGAAGATATAAAAGTAACAGGAACAGAAACAGTAACTGTACATAAAGA TGGGGTATTAAATCTAAGATTAAAAAGATCAGAAGATACAAAAGATGAAGAAATACCAATAGGAGTTCAT GCTTTTTCAGAAAGAGAGGGAAAACATGAAATGACAATAAAAGGAACATCAGAAGGAGAAGCAGGAACTT TAAACTTTATAACAAATGGAATAGGTAAAAAAATTGATGTTGATATGGAAAATATAGAACTTGAAAATAT GCTAATAAAAGCAAGTTCAATCATAGACAAAGCAGAAATAGATGGGGATTACATTCACTTAGGAGCAGGT TCAGACTTAAGTGGAATTGTAAATCCAAAGGTAAGTAAATATGATTCACTTAATGGAATATATAAAAGTT TGTACAGCAGTACAGATGAAAATATAGATGCTTTGAGAGATATGCTAAGCATGACTTACCTTGGAAAAAA CTATGATTATAATAATGCTACTGATGAGGAACAATTAAAAGCTTTAATGAGCTATTTAGACAGCATTTAT ACAGGAACTCCATATTCAGTTTCAAGTGAGCTTTCAAGAAAATCAATGGGAATGTTCAGAGATATAATCA CAGAAAATCAATTTAGACCAGACTTAAACAGATGGCTGGTAATGGGTGGACTAACTCATAGAGATGGAGG AACTAAAGACAGCTACTATGGACAGAATTATCATGGTTTTGATACAGGTACAGCAGATGTAGATGTGGAT ATGAAACTTACTGGAGCTTATGCCCTGGGGAAATATGGATATTCAGAAAATATATCTCTAGGAGTAACAG CAGGTGGAAACAGAAGCGAAGCTAAACTTCCAATGTCAAAAGTAAAAGGAAACAGTGGATATGTAGGAGC TTTTGCAGAAAACTATAGAGGAAACCTTACATTGAAAGCAGGAGCAGGAATTCAATATTCAGAATATGAT GCTAATAGAGCAACATTAGGAGGACACAGCTACAGTGATAAATATTCAGATATGACATATGATATTTACC TGAATGGAAGATATTCTCATAATATAGGAGAAAATCTATTCTTAGAACCATACGGAACATTGTCATATAC ATATATTAAGCAGGATAGCGCAGATGAAGGAAGCAAGGTTCTTGCAATAGAAACAGATTCAAAAACATTT GACTATACAGCAGCTAAAGTGGGAGTAGACCTTAAAAAAGTAATACCACATGAGAAAGGAAAAAGCACAC TGTCAACAGGAGTGAGCTATACAAGACTTCTTACTGGGTCAGATGAAGAAAATATCACAGGAAGATTTAA AGGAGAAAATGCAACTGACTTTGATATCTTAGTAGCTCATAAAAATGAACACAGTATAGGATTAAATGCT AAGTACACACTTGAACTTGAAAGTGGAATCCTGTTTGATGTAAAGGGAAGCTACAATGTAGAAAGAGATT CACATAATGGAAATGGAAAAAACAGAAATAAAGGTGAATGGATAATAGGAGCAGGATTGGGGTATAAGTT CTAA

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