F. varium 27725_FusoPortal_Gene_2322

InterPro predicted function: "PAS fold-4;DNA binding HTH domain
InterPro Accessions: IPR013656;IPR002197;IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2322.out

Amino Acids: 455

ORF FASTA file - Amino Acids

MEKNIFKTAIDQLNGVAITDEKGRYVYVNKSWSAYMGYELEQIKGMYVRDIFPTTLVDEV LKIGKTLVGQPFIFENSIIKQGFCTYIPLFENNKIIGVLVHVLFNQMEQAINFTDTLNDM ISNIEYYKQELREIRGAKYSIDNIVGESEAVKKMKAKIIKTAGSNSSVLIEGETGCGKEL VAHSIHDLSKRTSNPFIKINCAAIPEELIESELFGYEYGAFTGAKKGGKTGKFQMADKGS IFLDEINQLSSVLQPKILRVLQEREIERVGSEKSISIDVRIIAATNTSLEKMIKEGKFRS DLFYRLNVIKIKIPPLRERKEDIPLIVKDIINRLNFQLGMHIARVTDEVNEKLMEYDWPG NIRELQNVVERAMNMSDSMILQWKDFQEYFDSKHLKKLKRTKCSDNYDIKTIKKDFEKEV IAEALEKTENNRTKAAELLGVSRTMLYKKLKEYDL

Coding DNA - Genome Coordinates: 2555567-2556934 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGGAAAAAAATATATTTAAAACTGCCATTGATCAGTTGAACGGGGTAGCTATTACTGATGAAAAAGGAA GATATGTATATGTAAATAAGAGCTGGTCTGCATATATGGGTTATGAACTTGAGCAGATAAAGGGAATGTA TGTAAGAGATATTTTTCCTACAACTCTGGTAGATGAGGTATTAAAGATAGGAAAAACTTTAGTAGGTCAG CCCTTTATATTTGAAAACAGCATAATTAAACAGGGATTTTGTACTTATATTCCTCTTTTTGAAAATAATA AAATAATAGGAGTACTGGTTCATGTATTATTTAACCAGATGGAACAGGCTATAAATTTTACAGATACTTT GAATGATATGATTTCCAATATTGAATACTATAAACAGGAACTTAGAGAGATAAGAGGAGCTAAATATTCA ATAGATAATATTGTGGGAGAAAGTGAAGCTGTTAAGAAAATGAAAGCTAAAATAATAAAGACAGCAGGTT CAAATTCATCTGTGCTTATAGAAGGAGAAACAGGATGTGGGAAAGAACTGGTAGCTCATTCTATACATGA TTTAAGCAAGCGTACTTCAAATCCTTTTATCAAGATAAATTGTGCTGCTATTCCGGAAGAGCTTATAGAA TCAGAGCTTTTTGGATATGAATATGGTGCCTTTACAGGAGCTAAAAAAGGTGGGAAAACAGGTAAATTTC AGATGGCAGACAAGGGGAGTATTTTTCTTGATGAAATAAATCAGCTTTCCAGTGTACTTCAGCCAAAAAT ATTAAGAGTATTACAGGAAAGAGAAATAGAAAGAGTGGGAAGTGAAAAGAGCATTTCAATAGATGTGAGA ATAATTGCTGCTACAAATACTTCTTTGGAAAAAATGATTAAAGAAGGAAAATTTAGGAGTGACCTTTTTT ACAGGCTCAATGTTATAAAAATAAAAATACCACCATTGAGAGAGAGAAAAGAAGATATTCCACTCATAGT GAAAGATATCATCAACAGATTAAATTTTCAGCTGGGAATGCATATTGCCAGAGTTACTGACGAGGTAAAT GAAAAACTTATGGAATATGACTGGCCTGGAAATATTAGAGAACTGCAAAATGTAGTGGAAAGAGCAATGA ATATGTCAGATTCTATGATACTTCAATGGAAGGATTTTCAAGAATATTTTGACAGTAAACATTTAAAAAA ATTAAAGAGAACCAAGTGTTCAGATAATTATGACATAAAAACTATAAAAAAAGATTTTGAAAAAGAGGTC ATTGCAGAAGCGTTGGAAAAAACTGAAAATAATAGGACCAAGGCAGCAGAACTACTTGGAGTTTCACGGA CTATGCTCTATAAAAAACTCAAGGAGTATGACCTCTGA

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