F. varium 27725_FusoPortal_Gene_2408

InterPro predicted function: Outer membrane efflux protein
InterPro Accessions: IPR003423

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2408.out

Amino Acids: 472

ORF FASTA file - Amino Acids

MKNLILVVYSILIAGCSTLNTSDKNTKLFDDLSLKEKESKEYIKQYNNTLTLEAALKISV DRNLDLKVKSIEEEIAKLDKRIAFGNFLPKISLGYSYTMLNSKVMGEALDTGIPALPGFP ATLEGRLLDKSFSFFNVNAQIPIFVPSTWFLYSARQKGENISALTRDLTEKMIKLQTIGE YYYILALESEREYLSKELASAQELNKNAKVALETESILKWEYEGTEQMVKMKEHALKQNE RDLQNAKISLMNNLDLYPFLDIHLEKPTPFIEDNISMEEAVYESLKNSDFIKIRDTATDM NGDAVKIAITNFLPRIVLTGGYINTSNEALADPDFFMGTLGGFFSIFNGFQNINEYKKAR KNQEIAFIKKEQEIMKVIFETVNAYNVLESSKEERDIASKNYIVNKGRFEQKKAEKEVGA IDNWEYIKALADYEQALSIKEKAEYKYQISLSSLNMLMGKSIFTKGEKVYEK

Coding DNA - Genome Coordinates: 2672926-2671508 | Orientation: Reverse

ORF FASTA file - Coding DNA

TTGAAAAATTTAATCTTAGTAGTTTACTCTATTTTAATAGCAGGTTGTTCTACTCTTAATACCTCTGATA AAAATACTAAATTATTCGATGATCTTTCATTAAAAGAGAAAGAAAGCAAAGAATATATAAAACAATATAA TAACACACTTACTTTAGAAGCAGCTTTAAAAATAAGTGTAGACAGAAACCTTGATTTAAAAGTAAAGAGT ATTGAAGAGGAAATAGCAAAACTGGATAAAAGAATAGCTTTTGGTAATTTTCTTCCAAAAATTTCATTAG GGTATAGTTATACTATGCTGAACAGCAAAGTTATGGGTGAAGCTTTAGACACAGGAATTCCTGCTTTGCC TGGATTTCCAGCTACATTAGAAGGAAGGCTTCTTGATAAAAGTTTTTCTTTTTTCAATGTAAATGCACAA ATACCTATTTTTGTCCCATCTACGTGGTTCTTATACAGTGCTAGACAAAAGGGAGAAAATATATCTGCAC TTACTAGAGATCTTACAGAAAAAATGATTAAGCTCCAGACTATTGGTGAATATTACTATATTCTTGCTTT GGAATCTGAAAGAGAGTATTTGTCTAAAGAATTGGCTTCTGCTCAAGAATTAAATAAAAATGCAAAAGTT GCATTAGAAACCGAAAGCATTTTAAAGTGGGAGTATGAAGGAACAGAACAGATGGTAAAAATGAAAGAAC ATGCTTTGAAACAAAACGAGCGTGATCTTCAAAATGCTAAAATTTCTTTGATGAATAATCTTGATTTATA TCCATTTTTAGATATTCACTTGGAAAAGCCAACTCCTTTCATTGAAGATAATATTTCTATGGAAGAGGCT GTTTATGAGTCATTAAAAAATAGTGACTTTATAAAAATAAGGGATACTGCTACTGATATGAATGGAGATG CTGTAAAAATAGCAATTACAAATTTTCTTCCAAGAATAGTTTTGACTGGTGGATATATAAATACAAGTAA TGAAGCTCTTGCTGACCCTGATTTTTTTATGGGTACTCTTGGAGGATTTTTTTCTATATTTAATGGTTTT CAAAATATAAACGAATATAAAAAAGCCAGAAAAAATCAAGAAATTGCCTTCATCAAAAAAGAACAGGAAA TAATGAAAGTTATTTTTGAAACGGTAAATGCATATAATGTTTTAGAAAGTTCTAAAGAAGAAAGAGATAT AGCTTCAAAAAATTATATTGTAAATAAAGGAAGATTTGAACAGAAAAAAGCTGAAAAAGAAGTAGGAGCT ATTGATAACTGGGAATATATAAAAGCTTTGGCTGACTATGAACAGGCTTTAAGTATAAAAGAAAAAGCTG AATATAAATATCAGATTTCTTTATCTTCTCTTAATATGCTTATGGGAAAATCTATATTTACAAAAGGAGA AAAGGTATATGAAAAATAG

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