F. varium 27725_FusoPortal_Gene_2637

InterPro predicted function: RNA polymerase sigma factor 54 interaction domain
InterPro Accessions: IPR002078

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2637.out

Amino Acids: 686

ORF FASTA file - Amino Acids

MRKKVAIVTNAKEVISAYATQIKTLFGDLVETELYNFEDGSAKNISKTDLYLISTSACEF FDDKFLKNKNVVICDLTITKDKLEFLKKFPEGTRAVLFNVTVKMTYETISCLYHLGVNNI ELLPGYPQMEELPDTSIIITPAETALIPEKYSDREIIDIGHRVLDANTIIEIALKLEYEH ILYYKEIKEYLKTVASNDFSLNEILEKATTAESQLQILLKTMDIGIVAVDKDNYVCACNE GAEKILNRKASTLLGEKADILFPSIPFAEVKKNKKEIKSKLIKINEQPINLNITPIVRTA NYMGAFAFIQKFQDEELKQQELRRQLMNKGHVAKYNFDDIIGDSIQILKIKDIAKKMSKT NAAILITGESGTGKELFAHSIHNCSERKDAPFVAINCAAIPENLLESELFGYEEGAFTGA KKGGKIGLFEFAHMGTLFLDEIEGMSPLLQIKLLRVIQEKEIMKIGGDKVIKIDVRLIAA TNENLKSLMKEGKFRKDLYYRINTLPIMIPPLRERKEDISLLMNKFIKETGGEFRFSRKA KEAFDFYNWEGNIREMKNYAEFFSYLDKEVIEYEDLPAAITDYFEEEYQKDVNIKSEISD EEKLRRKAGRRYDSYFFILEKIKESNMKGKSSGRKGLAEECHKNDISLSEQEIRKILKDL EELGFIEIYKGRKGSILSDKGRKFIK

Coding DNA - Genome Coordinates: 2917016-2914956 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAGAAAAAAAGTAGCAATAGTGACTAATGCAAAAGAAGTAATAAGTGCATATGCAACTCAGATAAAAA CTCTTTTTGGAGATCTGGTAGAAACAGAGCTGTATAACTTTGAAGATGGAAGTGCAAAAAATATAAGTAA GACAGATCTTTATCTTATATCTACCAGTGCTTGTGAATTTTTTGATGATAAATTTTTGAAAAATAAAAAT GTGGTAATATGCGATTTAACTATAACAAAAGATAAACTTGAATTTCTTAAAAAATTTCCTGAAGGAACAA GAGCAGTGCTATTCAATGTAACAGTAAAAATGACATATGAAACTATTTCCTGTCTGTATCATTTAGGGGT AAATAATATTGAACTGCTTCCTGGATATCCACAGATGGAAGAATTACCTGATACTTCAATAATAATAACA CCAGCAGAAACAGCTTTGATACCTGAAAAATATTCAGATAGAGAAATAATTGACATAGGACATAGAGTAC TTGATGCTAATACTATAATAGAAATAGCTTTAAAACTAGAATATGAACATATACTTTATTATAAGGAAAT AAAAGAATACTTGAAAACAGTGGCTTCAAATGATTTCAGCCTCAATGAAATATTAGAGAAAGCTACAACG GCAGAAAGTCAGCTTCAGATATTATTAAAAACTATGGACATAGGGATAGTAGCTGTAGATAAAGATAATT ATGTATGTGCCTGTAATGAGGGAGCAGAAAAAATTTTAAACAGAAAAGCCAGTACACTTCTTGGAGAAAA AGCAGATATTCTATTTCCATCGATACCTTTTGCTGAAGTAAAGAAGAACAAAAAAGAGATAAAATCAAAG TTAATAAAAATAAATGAGCAGCCTATAAATTTAAACATAACTCCAATAGTAAGAACTGCTAACTATATGG GAGCTTTTGCTTTTATCCAAAAGTTCCAAGATGAAGAATTGAAGCAGCAGGAATTAAGAAGACAGTTGAT GAATAAAGGTCATGTGGCTAAGTATAATTTTGATGATATAATTGGAGATTCTATTCAGATATTGAAAATA AAAGATATTGCCAAAAAAATGTCAAAAACTAATGCAGCAATATTAATAACTGGTGAAAGTGGTACTGGAA AAGAATTATTTGCACACTCTATACATAATTGTTCAGAGAGAAAAGATGCACCATTTGTAGCTATAAATTG TGCAGCCATACCAGAAAATCTTTTGGAAAGTGAACTTTTCGGATATGAGGAAGGGGCTTTTACAGGAGCA AAAAAAGGTGGAAAGATAGGACTTTTTGAATTTGCTCATATGGGGACACTATTTCTTGACGAAATTGAGG GAATGAGTCCTCTGCTTCAAATAAAATTATTAAGAGTGATTCAAGAAAAGGAAATAATGAAGATAGGAGG AGATAAGGTAATAAAAATAGATGTCAGACTTATTGCAGCTACAAATGAAAATCTTAAATCTTTGATGAAA GAGGGAAAATTTAGAAAAGACTTATATTATAGAATAAATACTCTTCCTATAATGATACCTCCTCTTAGAG AAAGAAAAGAAGATATATCACTGCTTATGAATAAATTTATAAAAGAAACTGGGGGAGAATTTAGATTTTC TAGAAAGGCAAAAGAGGCCTTTGATTTCTATAACTGGGAAGGAAATATAAGAGAAATGAAAAATTATGCT GAGTTTTTCTCTTATCTGGATAAAGAAGTAATAGAATATGAAGATCTTCCAGCAGCTATAACCGATTACT TTGAAGAAGAATATCAAAAAGATGTTAATATAAAATCTGAAATTAGTGATGAGGAAAAATTAAGAAGAAA AGCTGGAAGAAGGTATGACAGTTATTTTTTTATTTTAGAAAAGATAAAAGAAAGCAACATGAAAGGAAAA TCTTCTGGAAGAAAAGGACTGGCAGAAGAATGTCATAAAAATGATATTTCCCTATCTGAACAGGAAATAA GAAAAATCTTAAAAGATTTAGAAGAACTTGGTTTTATAGAGATATATAAAGGAAGAAAAGGAAGCATTCT TTCAGATAAGGGAAGAAAATTTATAAAATAA

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