F. varium 27725_FusoPortal_Gene_2797

InterPro predicted function: LacI-type HTH domain;LacI-type HTH domain
InterPro Accessions: IPR000843;noIPR

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2797.out

Amino Acids: 347

ORF FASTA file - Amino Acids

MKKINSKIIAQLAGVSRSTVSRVINNYPDISPETKEKVLKVIEENGYYPNLSAKKLAGKK SGIIGLFVYTGKSSTNEKSYKKISESLYYSELISKIIDAAENLGYLILVSYINKKGTTWE KIFANGIIDGALVISGGKKFKEIENLINSKNKIVLLDYEKNVSNTTVSAINPNHFEGGYK ATQYLIENGHRNILHLTGEIKRKTSIKRARGYLKCLKDNNIEKQKIISGKFTQESSYKII DEYIKKNKEFDYTAIFAGNDYIALGAMRALSKHGIKVPQKVSIIGYDNMELCEYTTPKIT SVNHLDDFIAEKALIKLMNILKGEHGVVENTEIRVIERGSVLNIKTK

Coding DNA - Genome Coordinates: 3095055-3096098 | Orientation: Forward

ORF FASTA file - Coding DNA

GTGAAAAAAATTAATAGTAAAATTATAGCCCAACTTGCCGGAGTTTCTAGAAGTACAGTATCAAGAGTTA TAAATAATTATCCAGATATTTCACCTGAAACAAAAGAAAAAGTTTTAAAAGTTATAGAAGAAAATGGATA TTATCCAAATTTATCTGCAAAAAAATTAGCTGGAAAAAAATCTGGAATTATTGGATTATTTGTTTATACT GGAAAATCTAGTACGAATGAAAAAAGTTATAAAAAAATATCTGAATCTTTATATTATTCAGAATTAATAT CAAAAATTATTGATGCAGCAGAAAATTTAGGATATCTAATATTAGTTTCATATATTAATAAAAAAGGAAC TACATGGGAAAAAATATTTGCCAATGGAATTATAGATGGTGCTCTTGTTATTTCTGGGGGAAAAAAATTC AAAGAAATAGAAAATCTTATAAATTCTAAAAATAAAATAGTTCTTTTAGATTATGAAAAGAATGTATCTA ATACCACTGTATCTGCTATTAATCCTAATCATTTTGAAGGTGGATATAAGGCAACTCAATATTTGATTGA AAATGGACATAGAAACATTCTACATCTTACAGGAGAAATAAAGAGAAAAACTTCAATTAAAAGAGCACGA GGTTATTTAAAATGTTTGAAGGATAATAATATAGAAAAACAAAAAATAATATCTGGAAAGTTTACTCAAG AAAGTTCATACAAAATAATAGATGAGTATATTAAAAAAAATAAAGAATTTGATTATACTGCTATTTTCGC AGGTAACGATTACATAGCATTAGGTGCTATGAGAGCTTTATCAAAGCATGGAATTAAAGTTCCTCAAAAA GTTTCAATAATTGGTTATGATAATATGGAGCTTTGTGAATATACTACTCCAAAAATAACAAGTGTAAATC ATCTTGATGATTTTATTGCTGAAAAGGCATTAATAAAATTAATGAACATTCTAAAAGGGGAACATGGGGT TGTAGAAAATACCGAAATTAGAGTTATAGAACGAGGGAGTGTTTTAAATATAAAAACTAAATAG

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