F. varium 27725_FusoPortal_Gene_2844

InterPro predicted function: GGDEF domain;PAS fold-3;EAL domain
InterPro Accessions: IPR000160;IPR013655;IPR001633

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_2844.out

Amino Acids: 1029

ORF FASTA file - Amino Acids

MNLGKLKSESVYEAFLSLEKILKRDEYTYSEKLRILEEMKRECDISLLGVIILNNRKQIR SDFFWNDSEINNTTIKKFLYNNLLELFERSIKEGKYITLENDEKICKIKNTFLNNFLFLP VKNIQEGFCIGGILVGKKKERGDWKEKEIEIFKTFALVMEMFYTNKYRYDEFFTQSWIFN EILDNMNVNLYVTDIKNDKILYMNKKMKESYNLDEPEGKICWQVLQKGMEKRCNFCPVPK LLEKKDEKSSIVWRENGTITGKIYENYDSLIKWTDGSIVHFQESTDITDTVILKKNVIQD ILCDKALNWRAGKVEMAKAIQEAKKNKKNFVVASIDIDDLKIINERYGHIEGDKVIIETI KIIKNSLAEKEFIFRLEGDNFIVVFENRTEKEAIKLLYECIDKLKIKKKELKKEFDFSFC FGTVEIYPGEEIFENDIIARADKKLYFQKLKYHKNKIDSYMDKSSVNIDEKDFIYNKDLL YEALVMSTDDFIYICNMKTGRFKYTPAMVEMFNLPSEIIQNPIFIWKNIVHEDDWEKFYQ SNMEIGEGQTDYHLVEFRAKNKDGEYIWLKCRGHLMRDEVGEPSIFAGIMTLLGKQNKID ILTRLLNINEFSKSFEEKIKDYSVETIGMMILGIDDFKQVNEMYDRELGDSVLKMTSQII QSSLPRNALAYRLDGDQFGILVENTNSQELQNIYNNIKTKLSRQQLLEKSKIFVTISAGC SLYPQDGNKYQELYKYTDYSLQYAKKSGKDKIVFFSNDILEHKSRFLEILRHIRESIENG FEGFEVFYQPQVFCSGTNLKGVEALLRWKCKKFGSISPIEFIPILEESGLIIPVGKWVLR EAVKACKEMLEYNKDITVSVNCSFIQLLDENYLDDVKTIIAEEKVPPSNIVLELTESCII KSIETLHEMYSQMKEIGIKTAMDDFGTGYSSLGILKQVPANIVKIDRAFVKDIINSRFDI TFIEFITRICHSVGIKVCLEGIETKEEFDLVSNLEIDYIQGYYFGKPQPKKSIFENYLIE KTEAHRSSL

Coding DNA - Genome Coordinates: 3143844-3140755 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGAATCTGGGAAAATTGAAATCAGAAAGTGTTTATGAAGCTTTTTTAAGTTTAGAAAAAATATTAAAAC GAGATGAATATACATATTCTGAAAAACTAAGAATATTAGAAGAGATGAAAAGAGAATGTGATATTTCTTT ATTAGGTGTTATTATACTAAATAATAGAAAACAGATAAGAAGTGATTTTTTTTGGAATGATTCTGAAATA AACAATACTACAATAAAAAAATTTTTATATAACAATCTTTTAGAATTGTTTGAAAGATCAATTAAAGAAG GCAAATATATTACTTTAGAAAATGATGAAAAAATATGTAAAATAAAAAATACATTTTTAAATAATTTTTT ATTTCTTCCTGTAAAAAATATTCAGGAAGGTTTTTGTATTGGTGGAATACTTGTTGGAAAGAAAAAAGAA AGAGGAGATTGGAAGGAAAAAGAAATTGAAATATTTAAAACATTTGCTTTAGTCATGGAAATGTTTTATA CAAATAAATATAGGTATGATGAATTTTTTACACAATCTTGGATATTTAATGAAATTCTAGATAATATGAA TGTAAACCTTTATGTTACAGATATAAAGAATGATAAGATATTATATATGAATAAGAAAATGAAGGAAAGT TATAACCTTGATGAGCCTGAAGGAAAGATATGCTGGCAGGTTCTTCAAAAAGGAATGGAGAAAAGATGTA ATTTTTGTCCAGTACCGAAGCTTTTGGAAAAAAAAGATGAAAAATCAAGTATAGTATGGAGAGAAAATGG GACTATTACTGGGAAAATTTATGAGAATTATGATAGTCTAATAAAATGGACAGATGGCTCTATAGTACAT TTTCAAGAATCTACTGATATAACAGACACAGTTATTTTGAAGAAAAATGTTATTCAAGATATTTTATGTG ATAAGGCATTAAATTGGAGAGCAGGAAAAGTTGAGATGGCTAAGGCCATTCAAGAGGCTAAAAAAAATAA AAAGAATTTTGTAGTGGCTTCAATAGATATAGATGACTTAAAAATAATTAATGAAAGATATGGACATATA GAGGGAGATAAAGTTATTATAGAAACTATCAAAATAATAAAAAATTCTTTAGCTGAAAAAGAGTTTATTT TTAGATTGGAAGGGGATAACTTTATAGTCGTTTTTGAAAATAGAACTGAAAAAGAAGCTATTAAATTATT GTATGAATGTATTGATAAACTTAAAATAAAAAAGAAGGAATTAAAAAAAGAGTTTGATTTCTCTTTTTGT TTTGGAACAGTAGAAATTTATCCTGGTGAAGAGATTTTTGAAAATGATATTATAGCAAGAGCTGATAAAA AGCTTTATTTTCAAAAATTAAAGTATCATAAAAATAAAATAGATAGCTATATGGATAAAAGCAGTGTTAA TATAGACGAAAAAGATTTTATTTATAATAAAGATCTTTTATATGAAGCACTAGTTATGAGTACTGATGAT TTTATTTATATTTGCAATATGAAGACAGGAAGATTTAAATACACACCTGCTATGGTAGAGATGTTCAATC TTCCATCTGAGATAATTCAAAATCCAATTTTTATTTGGAAAAATATTGTTCATGAAGATGATTGGGAAAA ATTTTATCAATCTAATATGGAGATAGGGGAAGGGCAGACAGATTACCATTTGGTAGAGTTCAGAGCTAAA AATAAAGATGGAGAATACATATGGCTTAAATGTCGAGGGCATTTGATGCGTGATGAAGTTGGAGAACCAA GTATTTTTGCTGGGATAATGACTTTACTAGGAAAACAGAATAAAATAGATATTTTAACTAGGCTTCTTAA TATAAATGAATTTTCAAAATCTTTTGAAGAAAAAATAAAGGATTATTCTGTTGAAACTATAGGAATGATG ATTTTAGGAATAGATGATTTTAAACAGGTAAATGAAATGTATGATAGAGAATTGGGAGATAGTGTTTTAA AAATGACATCTCAAATTATTCAATCTTCTCTTCCAAGAAATGCTCTAGCATATAGATTAGATGGAGATCA ATTTGGAATTCTTGTAGAGAATACTAATAGTCAAGAACTACAAAATATATACAATAATATAAAAACAAAG CTTTCCCGTCAACAACTTCTCGAGAAATCTAAGATATTTGTAACTATTTCAGCAGGCTGCTCACTTTATC CACAAGATGGAAATAAATATCAAGAACTCTATAAATATACAGATTACTCACTGCAATATGCCAAAAAAAG TGGAAAGGATAAAATAGTATTTTTTTCTAATGATATATTAGAACATAAATCACGTTTTTTAGAAATACTT CGTCATATTAGAGAAAGTATAGAAAATGGATTTGAAGGTTTTGAAGTATTTTATCAGCCACAGGTGTTTT GTAGTGGAACTAATTTAAAGGGAGTGGAAGCATTATTGAGATGGAAATGTAAAAAATTTGGAAGCATTTC ACCAATAGAATTCATTCCAATATTAGAGGAAAGTGGATTGATAATACCAGTGGGCAAATGGGTGTTGAGA GAAGCTGTAAAAGCTTGTAAAGAAATGCTAGAGTATAATAAAGATATTACTGTGAGTGTAAATTGTTCGT TTATACAACTTTTAGATGAAAATTATTTAGATGATGTAAAAACTATAATTGCAGAAGAAAAAGTTCCCCC TTCAAATATTGTTTTGGAGTTAACAGAGAGTTGTATAATAAAAAGTATTGAAACATTGCATGAAATGTAT TCCCAGATGAAAGAAATTGGAATAAAAACAGCAATGGACGATTTTGGAACTGGTTATTCTTCATTAGGAA TATTAAAACAAGTTCCTGCAAATATAGTGAAAATAGACCGTGCTTTTGTAAAAGATATAATTAATAGTAG GTTTGATATTACCTTTATTGAATTTATTACAAGAATATGTCATTCAGTAGGGATAAAAGTATGTTTAGAA GGAATTGAAACTAAAGAAGAATTTGATCTTGTGAGCAACTTAGAAATTGATTATATTCAAGGTTATTATT TTGGAAAACCTCAACCTAAAAAAAGTATATTTGAAAACTATTTAATCGAAAAAACAGAAGCTCATAGAAG CAGTCTTTAA

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