F. varium 27725_FusoPortal_Gene_42

InterPro predicted function: "HTH-like domain;Transposase IS3/IS911family;Integrase
InterPro Accessions: IPR025948;IPR002514;IPR001584

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_42.out

Amino Acids: 392

ORF FASTA file - Amino Acids

MSKINNRYSKEFKLAVVKRYLEGNGGYLTVAKEMNVKNDSQVAAWVKKFKLLGETAFDFE TRGKVKGPIKGRPRTKFNSLEEEIEYLRMENEYLKKLRAQQKSKKINTFQIIDEMRKKYS LSSLCRFAECSRSGYYKWKNRTRTLSKRAEQNIEITALILECHKKIKGIYGVGRLQIYVN KNTNYQVNHKRIYRIMKENGIKSVIRKKYRYRHYQPARVAQNILNREFNETQPLKVLTMD TTYIEILGTRNFLYLNAVKDISNKEIVAYELSLSNNAELVDKTLEKLFKLPLAKNCLIHT DQGSTYTREKYIQRLESHGIRVSMSRRGNCWDNAPIESFFSHLKSEALYLNKVSNMETTI EIVKNYIDFYNNERIQKKLNGLSPVEYRIQTI

Coding DNA - Genome Coordinates: 46658-47836 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGTCTAAAATTAATAACAGATATTCTAAAGAATTTAAATTAGCTGTAGTTAAGCGATATCTTGAGGGAA ACGGTGGATATCTGACTGTAGCTAAAGAAATGAATGTTAAGAATGATTCCCAAGTTGCTGCTTGGGTAAA AAAGTTTAAATTACTTGGAGAAACTGCCTTTGATTTTGAAACTCGTGGTAAAGTTAAAGGACCCATCAAA GGAAGACCAAGAACTAAATTTAATTCTCTTGAAGAAGAGATTGAGTATTTGAGAATGGAGAATGAGTATT TAAAAAAGTTACGGGCTCAGCAAAAAAGTAAAAAAATTAATACATTTCAAATCATTGATGAGATGAGGAA AAAATATTCTTTAAGCTCATTATGTCGTTTTGCTGAGTGTTCAAGAAGTGGATATTACAAATGGAAAAAT AGAACTAGGACTCTCTCTAAAAGAGCTGAACAAAATATAGAAATAACAGCGCTAATACTTGAATGTCATA AAAAGATAAAAGGTATTTATGGCGTTGGAAGACTTCAAATTTATGTAAATAAAAATACAAATTATCAAGT AAATCATAAAAGAATATACAGAATTATGAAAGAAAATGGAATAAAATCCGTCATTAGAAAGAAATATAGA TATAGACATTATCAACCAGCTAGAGTAGCTCAAAATATTTTAAATCGTGAGTTTAATGAAACTCAACCAT TAAAGGTTTTAACTATGGATACAACATATATCGAAATACTTGGAACAAGAAATTTTTTGTATTTAAATGC AGTAAAAGATATTTCAAATAAAGAAATTGTAGCTTATGAATTAAGTTTAAGCAATAATGCTGAACTTGTA GATAAGACTTTAGAAAAACTTTTTAAACTTCCACTAGCTAAGAATTGTTTAATCCATACCGATCAAGGAA GTACATATACTAGAGAAAAATATATTCAAAGATTAGAAAGCCATGGGATAAGAGTTTCAATGTCTAGAAG AGGTAACTGCTGGGATAATGCACCTATTGAATCATTCTTTAGTCACCTTAAAAGTGAAGCATTGTATTTA AATAAGGTATCAAATATGGAAACAACAATTGAAATAGTGAAAAATTATATAGATTTTTACAACAATGAAA GGATCCAAAAAAAATTAAATGGTTTGAGTCCAGTAGAATACCGAATTCAAACCATTTAG

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