F. varium 27725_FusoPortal_Gene_795

InterPro predicted function: "RNA polymerase Rpb1
InterPro Accessions: IPR007083;IPR007066;IPR007081;IPR000722;IPR007080

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

Additional Links

Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_795.out

Amino Acids: 1320

ORF FASTA file - Amino Acids

MGIRSFEKIRIRLASPEKIEEWSYGEITKPETINYRTLNPERDGLFCEKIFGPTKDWECA CGKYKRMRYKGLVCEKCEVEVTRSKVRRERMGHISLAAPVSHIWYSKGTPNKMSLIIGLS PKELESVLYFARYIVTEAGESNLKEGKILTEKEYKLYKQLYGNKFEALMGAEAVLKLLEK THLESLRDELERELEDVTSSQKRKKVVKRLKIVRDFISSNNKPEWMILKNVPVIPADLRP MVQLDGGRFATSDLNDLYRRVINRNNRLKKLLEIKAPEIVVKNEKRMLQEAVDALIDNGR RGKPVVAQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLKMNQCGIPKK MALELYKPFIMRELVKRELASNIKTAKKLVEDADDKVWDVIEDVIQDHPVLLNRAPTLHR LSIQAFEPVLIEGKAIRLHPLVCSAFNADFDGDQMAVHLMLSPEAIMEAKLLMLAPNNII SPSNGEPIAVPSQDMVMGCFYMTKDRPGSKGEGKCFSNIDQALTAYNNGVLDTHAIIKVR IDGEMVETTPGRIMFNEMLPDVDKQYHVTFGKSQLKKLIARLYDEHGFAETAELINKIKD FGYHYGAMAGVSVGIEDLEIPAAKKEILAKADEEVAQIDADYKSGKIINEERYRKTIAVW SEATEAVTKAMMDGLDQFNPVYMMANSGARGNISQMRQLAAMRGNMADTQGRIIEVPIKA NFREGLTVLEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNAEDCGSEQGIE VGELVSEGKVIEKLEERIKGRVLAEDLVHEGEVIATRNTMIGKELIEKINELGIRKVKIR SPLTCSLEKGVCKKCYGMDLSNHREILLGEAVGVIAAQSIGEPGTQLTMRTFHTGGVATA ATVISGIRAENSGKVVYRDIKILENDTTGEQTVVSQSAKIIIGNYDYEIPSGSILKVKEG EKVEIGTTLVTFDPFHIPIIADQDGRIEYRELYVKENYDEKYDVTEYMAIKPVESGDINP RVVIFDNEGNTKGSYTIPFGAYLMVREGEEVKKGQTIAKIIKEGAGTKDITGGLPRVQEL FEARNPKGKAMLTDIEGKIEVTGKKKKGMRVIIVKSTTDPKDFREYLVPVGERLVVTDGM LVKAGDKITEGAISPFDVLNIKGLVAAEQFILESVQQVYRDQGVGVNDKHIEIIVKQMFK KVRIVDSGVSLFLEDEVVEKRIVDMENARLKELGKPLIKYEPIIQGITKAAVNTGSFISA ASFQETTKVLSNAAIEGKIDYLEGLKENVIIGKKIPAGTGFNAYKNVKAVELEDKELEEE

Coding DNA - Genome Coordinates: 874268-870306 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGGAATAAGAAGTTTTGAGAAAATAAGAATTAGATTAGCATCCCCTGAAAAAATAGAAGAATGGTCAT ATGGGGAAATTACAAAACCTGAAACTATCAATTATAGAACTTTAAATCCAGAAAGAGATGGTCTGTTTTG TGAAAAAATATTTGGACCAACTAAAGACTGGGAATGTGCTTGTGGTAAGTATAAAAGAATGAGATATAAA GGTCTTGTTTGTGAAAAGTGTGAGGTAGAAGTAACTAGATCTAAAGTAAGAAGAGAGAGAATGGGACATA TTTCTTTAGCTGCTCCTGTATCTCACATTTGGTACTCTAAGGGAACTCCAAATAAAATGTCACTTATTAT TGGATTATCTCCAAAAGAATTAGAATCTGTATTATATTTTGCAAGATATATAGTAACAGAAGCTGGTGAG AGTAACTTAAAAGAAGGAAAAATCCTTACTGAAAAGGAATATAAATTATATAAGCAGTTATATGGAAATA AATTTGAGGCTCTAATGGGAGCAGAAGCAGTATTAAAGCTTCTTGAAAAAACTCATCTCGAGTCTTTGAG AGATGAATTAGAAAGAGAATTAGAAGATGTAACTTCTTCACAAAAAAGAAAGAAAGTAGTAAAAAGACTT AAAATAGTTAGAGATTTTATTTCTTCTAATAATAAACCTGAATGGATGATACTTAAAAATGTTCCTGTCA TTCCAGCTGATTTAAGACCAATGGTACAGTTAGATGGGGGAAGATTTGCTACTTCTGACTTAAATGATCT TTATAGAAGAGTTATCAATAGAAATAATAGACTTAAAAAACTTTTAGAGATAAAAGCTCCTGAAATAGTT GTAAAGAATGAAAAAAGAATGCTTCAGGAAGCAGTAGATGCTCTTATTGATAATGGAAGAAGAGGAAAAC CAGTTGTTGCCCAAAATAACAGAGAGCTTAAATCTTTATCTGATATGTTAAAAGGTAAACAAGGTAGATT TAGACAAAACTTACTTGGAAAAAGGGTTGACTATTCAGCAAGATCGGTTATTGTTGTTGGACCATCATTG AAAATGAATCAATGTGGAATTCCTAAGAAAATGGCTCTTGAACTTTATAAGCCTTTCATTATGAGAGAAC TTGTAAAAAGAGAACTTGCATCAAATATTAAAACAGCAAAAAAATTAGTTGAAGATGCCGATGACAAAGT ATGGGATGTAATTGAAGATGTAATTCAAGATCACCCTGTATTATTAAATAGAGCTCCGACTCTACACAGA TTGTCTATTCAAGCATTTGAACCTGTACTGATAGAAGGAAAAGCTATAAGACTTCATCCATTAGTATGTT CAGCATTTAATGCTGACTTTGATGGGGACCAAATGGCTGTTCACTTAATGTTATCTCCAGAAGCTATAAT GGAAGCAAAGCTTTTGATGTTGGCTCCAAATAATATCATTTCTCCATCTAATGGAGAGCCAATAGCAGTA CCTTCGCAAGATATGGTTATGGGATGTTTCTATATGACTAAAGACAGACCAGGGTCAAAAGGAGAGGGAA AATGCTTCTCAAATATAGATCAAGCTCTTACAGCTTATAATAATGGAGTATTGGACACTCATGCTATAAT AAAAGTAAGAATTGATGGTGAGATGGTAGAAACTACTCCAGGAAGAATTATGTTTAATGAAATGCTTCCT GATGTGGATAAACAATATCATGTAACATTTGGTAAATCACAACTGAAAAAACTTATTGCTAGATTGTATG ATGAGCATGGATTTGCAGAAACTGCAGAGCTTATCAATAAAATTAAGGATTTTGGATATCATTATGGTGC TATGGCAGGGGTTTCAGTAGGAATAGAAGATTTAGAAATTCCAGCAGCTAAAAAAGAAATACTTGCAAAA GCAGATGAAGAAGTGGCCCAAATAGATGCTGATTATAAATCGGGAAAAATTATTAACGAAGAAAGATATA GAAAAACTATTGCTGTTTGGTCTGAAGCTACTGAAGCTGTAACTAAAGCAATGATGGATGGACTTGATCA ATTCAACCCAGTATATATGATGGCGAATTCAGGTGCCAGAGGTAACATCTCTCAGATGAGACAGCTAGCT GCCATGAGAGGTAACATGGCCGATACACAAGGAAGAATCATTGAGGTTCCTATTAAAGCGAATTTCCGTG AAGGATTAACAGTATTGGAATTCTTTATGTCATCACACGGGGCAAGAAAAGGACTGGCAGATACAGCTTT AAGAACTGCTGACTCAGGATATTTAACAAGAAGACTTGTTGATATTTCACATGAAGTTATAGTAAATGCT GAAGATTGTGGAAGTGAACAAGGAATAGAAGTTGGAGAACTTGTATCAGAAGGTAAAGTTATAGAAAAAT TAGAAGAAAGAATAAAAGGAAGAGTTCTAGCTGAAGATTTAGTACATGAAGGTGAAGTGATTGCTACTAG AAATACTATGATTGGAAAAGAACTTATAGAAAAAATAAATGAACTAGGTATCAGAAAAGTAAAAATTAGA TCTCCATTAACTTGTTCTTTAGAAAAAGGGGTATGTAAAAAATGTTATGGTATGGATTTATCTAATCATA GAGAAATACTTCTAGGAGAAGCAGTTGGAGTTATTGCAGCTCAGTCAATTGGAGAACCTGGTACACAGCT TACAATGAGAACATTCCATACTGGAGGAGTTGCAACAGCAGCTACTGTAATAAGTGGAATTAGAGCAGAA AACTCAGGTAAAGTTGTATATAGAGATATAAAAATTCTTGAAAATGACACTACTGGAGAGCAAACAGTTG TAAGTCAGTCTGCTAAAATAATTATAGGAAACTATGACTATGAGATTCCATCAGGATCAATACTTAAAGT AAAAGAGGGAGAAAAAGTTGAAATAGGAACTACATTAGTAACATTTGATCCATTCCATATCCCTATTATA GCTGACCAAGATGGAAGAATAGAATACAGAGAACTTTATGTAAAAGAAAATTATGATGAAAAATATGATG TTACTGAGTATATGGCTATTAAGCCAGTTGAATCAGGAGATATCAACCCAAGAGTTGTAATCTTTGATAA CGAGGGTAATACAAAAGGAAGTTATACTATCCCATTCGGTGCTTACTTGATGGTAAGAGAGGGAGAAGAA GTTAAAAAAGGTCAGACAATAGCTAAAATTATCAAAGAAGGTGCTGGAACAAAAGATATTACTGGAGGAC TTCCAAGAGTACAAGAGCTATTTGAAGCAAGAAATCCTAAAGGTAAAGCAATGCTTACTGATATAGAAGG TAAAATAGAAGTAACTGGTAAGAAAAAGAAAGGTATGAGAGTTATCATTGTAAAATCGACAACTGATCCA AAAGACTTCAGAGAATATTTAGTACCTGTAGGAGAGCGTTTAGTTGTAACTGATGGTATGCTTGTTAAGG CTGGAGATAAAATAACTGAAGGAGCTATTTCTCCATTTGACGTATTGAATATCAAAGGGCTTGTAGCTGC AGAACAGTTTATACTTGAATCAGTACAGCAAGTATATAGAGATCAGGGAGTAGGAGTTAATGATAAACAT ATTGAGATTATTGTTAAACAGATGTTTAAGAAAGTAAGAATTGTTGATTCTGGAGTATCTCTATTCTTAG AAGATGAGGTTGTTGAAAAGAGAATTGTTGATATGGAAAATGCAAGATTAAAAGAGTTAGGAAAACCTTT AATTAAGTATGAACCAATCATTCAAGGTATAACTAAAGCTGCTGTAAATACAGGAAGTTTTATCTCAGCT GCTTCATTCCAAGAAACTACAAAAGTTCTTTCTAATGCAGCAATAGAAGGAAAAATTGACTATTTAGAAG GACTGAAAGAAAATGTAATTATAGGTAAAAAGATTCCAGCAGGAACTGGATTTAATGCATACAAAAATGT AAAGGCAGTTGAACTGGAAGATAAAGAATTAGAAGAAGAATAA

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