F. varium 27725_FusoPortal_Gene_838

InterPro predicted function: OmpA-like domain;YMGG-like Gly-zipper
InterPro Accessions: IPR006665;IPR027367

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_838.out

Amino Acids: 216

ORF FASTA file - Amino Acids

MNTKKAMSSFLLALMITGCTSSPFLDETGSVNSKTKGTAGGAAAGALIGQLIGKDTKGTL IGAGVGALAGLGWGAYRDRQEQELRERLKNTEVQVSQKGDNLNLNLPGGVTFATDSSNIV PSFYGPLNSIATVLVQYPETRIIVNGYTDNVGSASYNITLSEKRAASVRNYLIQQGVSAR RISYVGYGMENPRATNSTAAGRAENRRVELEILPMN

Coding DNA - Genome Coordinates: 925554-926204 | Orientation: Forward

ORF FASTA file - Coding DNA

ATGAATACAAAAAAAGCCATGTCTAGTTTTTTACTAGCTTTGATGATTACAGGTTGTACTTCTTCACCTT TCCTAGATGAAACTGGTTCTGTAAATAGTAAAACTAAAGGAACTGCTGGTGGTGCAGCAGCAGGTGCTTT AATAGGGCAACTTATAGGTAAAGATACTAAAGGAACTCTTATAGGTGCTGGAGTAGGTGCCCTAGCTGGA TTAGGTTGGGGGGCTTATAGAGATCGTCAAGAACAGGAGCTTAGGGAACGTTTAAAAAACACTGAAGTAC AAGTCAGCCAAAAAGGAGATAATTTAAATCTAAATCTTCCTGGAGGAGTTACTTTTGCTACTGATAGTTC TAATATAGTTCCAAGTTTCTATGGTCCATTAAATTCTATAGCTACTGTACTTGTTCAATATCCAGAAACT AGAATTATAGTTAATGGTTATACTGATAATGTAGGAAGTGCAAGCTATAATATTACTCTATCAGAAAAAA GAGCTGCTAGTGTAAGAAATTATCTTATTCAACAAGGTGTTTCTGCTAGAAGAATATCTTATGTAGGATA TGGAATGGAAAATCCTAGAGCTACTAACAGTACTGCTGCTGGAAGAGCTGAAAACAGAAGAGTGGAACTA GAAATTTTACCTATGAATTAA

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