F. varium 27725_FusoPortal_Gene_875

InterPro predicted function: Autotransporter beta-domain
InterPro Accessions: IPR005546

Link to full Interpro analysis


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Return to complete Genome Map of F. varium 27725

FASTA file of all annotated F. varium 27725 genes - Amino Acids | FASTA file of all annotated F. varium 27725 genes - DNA

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Hidden Markov Model (HMMScan) for domains: 27725_FusoPortal_Gene_875.out

Amino Acids: 1049

ORF FASTA file - Amino Acids

MGKKTKIILGILAIFMIVGNIGYGESLTEEKEEIYIDKIDNNVESDGDINMSGEIGVKVE NGKEEIIKGNNITITGDNGNGVHTISQQKESPSTIIIEGKGKVTITGQEVGVNIVKSEGN ISGENIELIGKEMNGVSLGDGAEITINGTESLDISAGWSGLYFSNSKGDISSKVINIVGG SNGAYFENSTEKTSIQGEDITIIGKKYDGIYLDGSGSLDLKGVNTRIEGKINGIQLWNNG NSSKITIESDMISLSGETQDGILVEEEGSIVEIVGKNTFISGYQNGIMALARGEVIINSD EVSIRSNSNQSNQGNAIYTVDEGSVEITANNTNIYSEYIGIHAQTGEIIINSSGKNEIKG EENGVYASAMTYTDSMNTEIGDIKISGKLNQISGKEGVTVVGGKIEINSTEKTVILGEEY GVRSNSPGGKIDITSLNTLIKAQAENGVGIKASTGADLNIDSTNTIIFGKKYSIYAESTQ KPSDATLSEITLSENGSHEIYGNIKSHGNTSIKIGGKGNKISSSSDNEPLKVTATKGGKI DISLVDGILTGIVDDGRAADANANGGTINLNLDNGTWKTQGKSFVTSIDLRNNGNIIFTE EGTSVDIENLSGDGNGTFGMTVNAINKSEGNMLYVQESNGGIYNVALQNSNLEDIKIGER IRFATIGNNAKTNNLGFKVLDIKERGIRDINFKVEKEEFDENDSENEIYNGGQTSSDKKP GNGYVVDNYQDGENWYLTRNSSGNINDIGTAIMEAAKSNYANAVYMDNLNKRLGDMSFAD GESGLWVRMRNDKVGEDNHYKLHNYMTQIGYDKSYSMENGIEHRGIAFEYGKGDMKYKEL KGNTDTDKYILTLYKTKVRDNKVYTDYTLRGGAISNDFTVYGRETGAKVTGKYKNMVLGA GTEVGKRYELDKNWYIEPQAQLQYTYINSTDYTTNQMTKVDLDEIHSLIGRAGIKLGHDS YKGNKKDNTVYVKADINHEFLGEQNVKAKDETGRLDKTYKNNETWVEIGIGASKKITPDL NVYADVEKQLGSNKDNKNWQVNVGFRYKF

Coding DNA - Genome Coordinates: 963231-960082 | Orientation: Reverse

ORF FASTA file - Coding DNA

ATGGGAAAGAAGACAAAAATAATTCTAGGAATCTTGGCTATTTTTATGATTGTAGGGAATATTGGATATG GTGAAAGCTTAACTGAAGAAAAAGAAGAAATATATATAGATAAAATAGATAATAATGTAGAATCTGACGG AGATATAAATATGTCAGGAGAAATTGGAGTAAAGGTAGAAAATGGTAAGGAAGAAATAATAAAAGGAAAT AATATAACAATAACAGGTGATAACGGAAATGGAGTACATACAATTAGTCAACAAAAGGAATCCCCATCGA CTATAATTATAGAAGGAAAGGGCAAAGTAACAATTACAGGGCAAGAAGTAGGAGTAAATATAGTAAAATC TGAAGGGAATATATCAGGAGAGAATATAGAATTAATAGGAAAAGAAATGAATGGAGTATCTTTAGGAGAT GGAGCTGAAATAACTATAAATGGAACTGAAAGTCTGGATATTAGTGCCGGTTGGAGTGGTTTATATTTTT CTAATTCTAAAGGAGATATATCAAGCAAAGTGATAAATATTGTTGGAGGGAGTAATGGAGCATACTTTGA GAATTCTACAGAAAAAACAAGCATTCAAGGAGAAGATATAACAATAATAGGGAAGAAATATGATGGGATA TATCTTGATGGTAGTGGAAGTTTGGATTTAAAAGGGGTAAATACTCGTATAGAAGGGAAAATTAATGGTA TACAATTATGGAATAATGGTAATTCAAGTAAAATTACAATAGAGTCAGATATGATTAGTTTGTCTGGAGA AACACAAGATGGAATTTTAGTAGAGGAAGAAGGAAGTATAGTAGAGATAGTAGGAAAAAATACTTTTATT TCAGGATATCAAAATGGTATTATGGCATTAGCTAGAGGAGAAGTTATAATAAATTCAGATGAAGTTAGTA TAAGAAGTAATAGTAATCAGAGTAATCAAGGGAATGCCATTTATACGGTGGATGAAGGATCAGTAGAAAT AACTGCTAATAATACTAATATTTATTCAGAATACATAGGGATTCATGCTCAAACTGGAGAAATAATAATA AACTCTAGTGGAAAGAATGAAATTAAAGGGGAAGAGAATGGAGTTTATGCTAGTGCTATGACTTATACTG ATTCTATGAATACTGAAATAGGAGATATTAAAATTTCTGGAAAATTAAATCAAATTTCAGGAAAAGAAGG AGTTACAGTAGTAGGGGGAAAAATAGAAATAAATTCTACTGAGAAGACAGTAATTTTAGGAGAAGAATAT GGAGTTAGATCAAATAGTCCAGGAGGAAAGATAGATATAACTTCATTAAATACACTAATTAAAGCCCAAG CTGAAAATGGAGTAGGGATTAAAGCAAGTACAGGAGCAGATTTAAATATAGATTCTACAAATACTATTAT TTTTGGGAAAAAATATTCTATTTATGCTGAGAGTACACAAAAACCATCAGATGCTACTTTGTCAGAAATT ACTTTATCAGAGAATGGAAGTCATGAAATTTATGGAAATATAAAAAGTCATGGAAATACTAGTATAAAAA TAGGTGGAAAAGGAAATAAAATTTCTTCTTCAAGTGATAATGAACCATTGAAAGTTACAGCAACAAAAGG TGGAAAGATAGATATAAGTTTAGTAGATGGAATTTTAACAGGAATTGTAGATGATGGAAGAGCTGCAGAT GCTAATGCTAATGGTGGAACTATAAACTTAAATCTAGACAATGGTACATGGAAGACTCAAGGTAAAAGTT TTGTAACATCAATTGATTTAAGAAATAATGGAAATATAATTTTTACTGAAGAAGGAACATCAGTTGATAT TGAAAATTTAAGTGGAGATGGAAATGGAACATTTGGAATGACAGTAAATGCAATAAATAAATCAGAGGGA AATATGCTTTATGTCCAAGAGTCTAATGGTGGAATATATAATGTTGCTCTACAAAATAGTAATCTTGAAG ATATAAAAATTGGTGAAAGAATACGTTTTGCAACAATTGGAAATAACGCGAAGACTAATAATTTAGGATT TAAAGTTTTAGATATAAAAGAAAGAGGAATAAGAGATATAAATTTCAAAGTTGAAAAAGAAGAGTTTGAT GAAAATGATAGTGAGAATGAAATCTACAATGGGGGACAAACTTCAAGTGATAAGAAGCCGGGAAATGGCT ATGTTGTAGACAATTATCAAGATGGAGAAAACTGGTATTTAACTAGAAATAGCAGTGGAAATATCAATGA TATAGGAACAGCTATTATGGAAGCAGCAAAATCAAATTATGCTAATGCAGTATATATGGATAATCTGAAT AAACGTCTTGGAGATATGAGCTTTGCAGATGGGGAATCAGGACTATGGGTAAGAATGAGAAATGATAAAG TAGGAGAGGATAATCATTACAAACTTCATAATTACATGACTCAAATAGGTTATGACAAATCATATTCAAT GGAAAATGGAATAGAGCATAGAGGTATTGCATTTGAGTATGGAAAAGGAGATATGAAGTATAAAGAACTT AAAGGAAATACAGATACAGACAAATATATACTAACACTGTATAAAACAAAAGTAAGAGATAATAAAGTAT ATACAGACTACACTTTAAGGGGAGGAGCTATTTCAAATGACTTTACTGTGTATGGAAGGGAAACAGGAGC GAAAGTAACAGGTAAGTACAAGAATATGGTATTAGGTGCAGGAACAGAAGTAGGAAAAAGATATGAACTT GATAAGAATTGGTATATAGAACCACAAGCGCAATTACAATATACATATATAAATTCAACAGACTATACGA CAAACCAGATGACAAAAGTTGATCTTGATGAAATTCACAGTTTGATAGGAAGAGCAGGTATCAAATTAGG ACATGATTCATATAAAGGGAATAAAAAAGATAATACAGTTTATGTAAAAGCAGATATAAATCATGAGTTT CTAGGAGAACAGAATGTAAAAGCAAAAGATGAAACAGGAAGACTAGACAAGACATATAAGAATAATGAAA CATGGGTAGAGATAGGAATTGGAGCATCAAAGAAAATAACTCCAGATTTAAATGTATATGCAGATGTAGA AAAACAACTAGGAAGTAATAAAGATAATAAAAACTGGCAGGTAAATGTAGGATTTAGATATAAATTTTAA

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